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| Locus | Common name | Short description |
| AT5G52510 | SCL8 | SCARECROW-like 8 (.1) |
>AT5G52510.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SalI, SpeI, StyI, XbaI, XhoI
| Name | Recognition sequence | Cut positions |
| BamHI | G|GATCC | 473 |
| BglII | A|GATCT | 61 |
| EcoRI | G|AATTC | 897, 1197, 1542, 1638 |
| EcoRV | GAT|ATC | 1120 |
| HindIII | A|AGCTT | 910, 1429 |
| HpaI | GTT|AAC | 1144 |
| SacI | GAGCT|C | 735, 1012 |
| SmaI | CCC|GGG | 1836 |
Click here to view TAIR data
>AT5G52510.1 length:1923
ATGGAATCTG GTTTCTCCGG CGGTGGTGGT GGGTCGGATT TTTACGGCGG | 50 |
TGGTGGTGGT AGATCTATAC CTGGAGGTCC AGGAACTGTT ATCAACGTCG | 100 |
GTAACAATAA TCCTCAGACG ACGTATAGAA ACCAGATTCC TGGAATCTTC | 150 |
TTTGATCAGA TCGGAAACAG AGTCGCCGGC GGTAATGGAT TCTCCGGGAA | 200 |
AAGGACTTTA GCAGATTTTC AAGCGGCTCA GCAACATCAA CAACAACAAC | 250 |
AACAACAACC GTTTTATAGT CAAGCAGCTC TCAACGCTTT TCTTTCAAGG | 300 |
TCTGTGAAGC CTCGAAATTA TCAGAATTTT CAATCTCCGT CGCCGATGAT | 350 |
TGATCTCACG TCGGTGAATG ATATGAGTTT GTTTGGTGGT TCTGGTTCAT | 400 |
CTCAGCGTTA CGGTTTACCG GTTCCCAGGT CTCAGACGCA ACAGCAACAA | 450 |
TCGGATTACG GTTTATTTGG TGGGATCCGA ATGGGAATCG GGTCGGGTAT | 500 |
TAATAATTAT CCAACATTAA CCGGCGTTCC GTGTATTGAA CCGGTTCAAA | 550 |
ACCGGGTTCA TGAATCGGAG AACATGTTGA ATAGTTTAAG AGAGCTTGAG | 600 |
AAACAGCTTT TAGATGATGA CGATGAGAGT GGTGGTGATG ATGACGTGTC | 650 |
AGTTATAACA AATTCAAATT CCGATTGGAT TCAAAATCTC GTGACTCCGA | 700 |
ACCCGAACCC GAACCCGGTT TTGTCTTTTT CACCGAGCTC TTCTTCTTCG | 750 |
TCTTCTTCGC CTTCTACAGC TTCGACGACG ACATCGGTAT GTTCTAGGCA | 800 |
AACGGTTATG GAAATCGCGA CGGCGATCGC GGAAGGGAAA ACAGAGATAG | 850 |
CGACGGAGAT TTTGGCGCGT GTTTCTCAAA CGCCTAATCT TGAGAGGAAT | 900 |
TCAGAGGAGA AGCTTGTTGA TTTCATGGTG GCTGCGCTTC GATCGAGGAT | 950 |
AGCTTCTCCA GTGACGGAAT TGTATGGGAA GGAGCATTTA ATCTCGACTC | 1000 |
AATTGCTCTA CGAGCTCTCT CCTTGTTTCA AACTCGGTTT CGAGGCCGCG | 1050 |
AATCTCGCCA TTCTCGACGC CGCCGATAAC AACGACGGTG GAATGATGAT | 1100 |
ACCGCACGTT ATCGATTTCG ATATCGGAGA AGGTGGACAA TACGTTAACC | 1150 |
TTCTCCGTAC ATTATCCACG CGCCGGAATG GTAAAAGTCA GAGTCAGAAT | 1200 |
TCTCCGGTGG TTAAGATCAC CGCCGTGGCG AACAACGTTT ACGGATGTTT | 1250 |
AGTCGATGAC GGTGGAGAAG AGAGGTTAAA AGCCGTCGGA GATTTGTTGA | 1300 |
GCCAACTCGG TGATCGACTC GGTATCTCCG TAAGTTTCAA CGTGGTGACG | 1350 |
AGTTTACGAC TCGGTGATCT GAATCGTGAA TCTCTCGGGT GTGATCCCGA | 1400 |
CGAGACTTTG GCTGTGAACT TAGCTTTCAA GCTTTATCGT GTTCCCGACG | 1450 |
AAAGCGTATG CACGGAGAAT CCAAGAGACG AACTTCTCCG GCGCGTGAAG | 1500 |
GGACTTAAAC CGCGCGTGGT TACTCTAGTG GAGCAAGAAA TGAATTCGAA | 1550 |
TACGGCGCCG TTTTTAGGGA GAGTGAGTGA GTCATGCGCG TGTTACGGTG | 1600 |
CGTTGCTTGA GTCGGTCGAG TCTACGGTTC CTAGTACGAA TTCCGACCGT | 1650 |
GCCAAAGTTG AGGAAGGAAT TGGCCGGAAG CTAGTAAACG CGGTGGCGTG | 1700 |
CGAAGGAATC GATCGTATAG AGCGGTGCGA GGTGTTCGGG AAATGGCGAA | 1750 |
TGCGGATGAG CATGGCTGGG TTTGAGTTAA TGCCATTGAG TGAGAAGATA | 1800 |
GCGGAGTCGA TGAAGAGTCG TGGAAACCGA GTCCACCCGG GCTTTACCGT | 1850 |
TAAAGAAGAT AACGGAGGTG TGTGCTTTGG TTGGATGGGA CGGGCACTCA | 1900 |
CTGTCGCATC CGCTTGGCGT TAA | 1950 |
>AT5G52510.1 longest ORF length:640
MESGFSGGGG GSDFYGGGGG RSIPGGPGTV INVGNNNPQT TYRNQIPGIF | 50 |
FDQIGNRVAG GNGFSGKRTL ADFQAAQQHQ QQQQQQPFYS QAALNAFLSR | 100 |
SVKPRNYQNF QSPSPMIDLT SVNDMSLFGG SGSSQRYGLP VPRSQTQQQQ | 150 |
SDYGLFGGIR MGIGSGINNY PTLTGVPCIE PVQNRVHESE NMLNSLRELE | 200 |
KQLLDDDDES GGDDDVSVIT NSNSDWIQNL VTPNPNPNPV LSFSPSSSSS | 250 |
SSSPSTASTT TSVCSRQTVM EIATAIAEGK TEIATEILAR VSQTPNLERN | 300 |
SEEKLVDFMV AALRSRIASP VTELYGKEHL ISTQLLYELS PCFKLGFEAA | 350 |
NLAILDAADN NDGGMMIPHV IDFDIGEGGQ YVNLLRTLST RRNGKSQSQN | 400 |
SPVVKITAVA NNVYGCLVDD GGEERLKAVG DLLSQLGDRL GISVSFNVVT | 450 |
SLRLGDLNRE SLGCDPDETL AVNLAFKLYR VPDESVCTEN PRDELLRRVK | 500 |
GLKPRVVTLV EQEMNSNTAP FLGRVSESCA CYGALLESVE STVPSTNSDR | 550 |
AKVEEGIGRK LVNAVACEGI DRIERCEVFG KWRMRMSMAG FELMPLSEKI | 600 |
AESMKSRGNR VHPGFTVKED NGGVCFGWMG RALTVASAWR | 650 |