Locus |
Common name |
Short description |
AT5G52600 |
AtMYB82 |
myb domain protein 82 (.1) |
>AT5G52600.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
HindIII
| A|AGCTT |
247 |
NcoI
| C|CATGG |
438 |
StyI
| C|C[AT][AT]GG |
438 |
Click here to view TAIR data
>AT5G52600.1 length:606
ATGGAATGCA AAAGAGAAGA AGGGAAGTCT TACGTGAAGA GAGGGTTGTG | 50 |
GAAACCAGAA GAAGATATGA TATTAAAAAG CTATGTTGAG ACTCATGGTG | 100 |
AAGGAAACTG GGCAGACATT TCTCGTAGAT CCGGGTTGAA GAGAGGAGGA | 150 |
AAAAGCTGTA GGCTGAGATG GAAGAACTAT CTAAGACCAA ATATCAAAAG | 200 |
AGGAAGCATG TCACCACAAG AACAAGACCT TATCATCCGC ATGCATAAGC | 250 |
TTCTTGGAAA CAGATGGTCG TTGATCGCTG GTCGCCTTCC AGGTCGTACT | 300 |
GACAATGAAG TGAAGAACTA CTGGAATACT CATTTGAACA AGAAACCTAA | 350 |
TTCCCGAAGA CAGAATGCAC CTGAATCAAT CGTCGGCGCC ACTCCTTTCA | 400 |
CGGATAAGCC AGTTATGTCT ACAGAACTGA GAAGAAGCCA TGGAGAAGGA | 450 |
GGAGAAGAGG AGAGCAATAC CTGGATGGAG GAGACCAACC ACTTTGGCTA | 500 |
TGACGTCCAC GTAGGATCTC CCTTGCCACT TATTTCCCAC TACCCAGACA | 550 |
ACACTCTCGT GTTTGACCCA TGTTTTTCCT TTACCGATTT CTTTCCTCTG | 600 |
CTTTAG | 650 |
>AT5G52600.1 longest ORF length:201
MECKREEGKS YVKRGLWKPE EDMILKSYVE THGEGNWADI SRRSGLKRGG | 50 |
KSCRLRWKNY LRPNIKRGSM SPQEQDLIIR MHKLLGNRWS LIAGRLPGRT | 100 |
DNEVKNYWNT HLNKKPNSRR QNAPESIVGA TPFTDKPVMS TELRRSHGEG | 150 |
GEEESNTWME ETNHFGYDVH VGSPLPLISH YPDNTLVFDP CFSFTDFFPL | 200 |
L | 250 |
|