fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G52600 AtMYB82 myb domain protein 82 (.1)

>AT5G52600.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
HindIII A|AGCTT 247
NcoI C|CATGG 438
StyI C|C[AT][AT]GG 438


Click here to view TAIR data

>AT5G52600.1 length:606
ATGGAATGCA AAAGAGAAGA AGGGAAGTCT TACGTGAAGA GAGGGTTGTG 
50
GAAACCAGAA GAAGATATGA TATTAAAAAG CTATGTTGAG ACTCATGGTG 
100
AAGGAAACTG GGCAGACATT TCTCGTAGAT CCGGGTTGAA GAGAGGAGGA 
150
AAAAGCTGTA GGCTGAGATG GAAGAACTAT CTAAGACCAA ATATCAAAAG 
200
AGGAAGCATG TCACCACAAG AACAAGACCT TATCATCCGC ATGCATAAGC 
250
TTCTTGGAAA CAGATGGTCG TTGATCGCTG GTCGCCTTCC AGGTCGTACT 
300
GACAATGAAG TGAAGAACTA CTGGAATACT CATTTGAACA AGAAACCTAA 
350
TTCCCGAAGA CAGAATGCAC CTGAATCAAT CGTCGGCGCC ACTCCTTTCA 
400
CGGATAAGCC AGTTATGTCT ACAGAACTGA GAAGAAGCCA TGGAGAAGGA 
450
GGAGAAGAGG AGAGCAATAC CTGGATGGAG GAGACCAACC ACTTTGGCTA 
500
TGACGTCCAC GTAGGATCTC CCTTGCCACT TATTTCCCAC TACCCAGACA 
550
ACACTCTCGT GTTTGACCCA TGTTTTTCCT TTACCGATTT CTTTCCTCTG 
600
CTTTAG
650

>AT5G52600.1 longest ORF length:201
MECKREEGKS YVKRGLWKPE EDMILKSYVE THGEGNWADI SRRSGLKRGG 
50
KSCRLRWKNY LRPNIKRGSM SPQEQDLIIR MHKLLGNRWS LIAGRLPGRT 
100
DNEVKNYWNT HLNKKPNSRR QNAPESIVGA TPFTDKPVMS TELRRSHGEG 
150
GEEESNTWME ETNHFGYDVH VGSPLPLISH YPDNTLVFDP CFSFTDFFPL 
200
L
250