fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G53660 ATGRF7 growth-regulating factor 7 (.1)

>AT5G53660.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRI, HpaI, KpnI, NcoI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, StyI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 498
EcoRV GAT|ATC 991
HindIII A|AGCTT 508
NdeI CA|TATG 134
SpeI A|CTAGT 1063
XbaI T|CTAGA 1042


Click here to view TAIR data

>AT5G53660.1 length:1098
ATGGACTTTC TCAAAGTTTC AGACAAGACA ACAATTCCAT ATAGAAGTGA 
50
TTCTTTGTTT AGTTTGAATC AGCAACAATA CAAAGAGTCT TCTTTTGGAT 
100
TCAGAGACAT GGAGATTCAT CCGCATCCTA CTCCATATGC AGGAAATGGA 
150
CTTTTGGGTT GTTATTACTA TTACCCTTTC ACAAACGCAC AATTGAAGGA 
200
GCTTGAGAGA CAAGCAATGA TCTACAAGTA CATGATCGCA TCTATTCCTG 
250
TTCCTTTCGA TCTACTTGTT TCTTCACCAT CCTCTGCCTC TCCTTGTAAC 
300
AATAAAAACA TCGCCGGAGA TTTAGAGCCG GGAAGATGCC GGAGAACAGA 
350
CGGAAAGAAA TGGAGATGCG CGAAAGAAGT CGTCTCTAAT CACAAATACT 
400
GTGAGAAACA CTTACACAGA GGTCGTCCTC GTTCAAGAAA GCATGTGGAA 
450
CCTCCTTATT CTCGCCCTAA CAACAATGGT GGTTCTGTGA AAAACAGAGA 
500
TCTCAAAAAG CTTCCTCAAA AGTTATCTAG TAGTTCCATC AAAGACAAAA 
550
CACTTGAGCC AATGGAGGTT TCATCATCAA TCTCAAACTA TAGAGACTCC 
600
AGAGGAAGTG AGAAATTTAC TGTATTGGCA ACAACAGAGC AAGAGAACAA 
650
GTATCTGAAT TTCATAGATG TATGGTCCGA TGGAGTAAGA TCATCTGAAA 
700
AACAGAGTAC AACTTCAACA CCTGTTTCTT CTTCCAATGG CAATCTCTCT 
750
CTTTACTCGC TTGATCTCTC AATGGGAGGA AACAACTTAA TGGGCCAAGA 
800
CGAAATGGGC CTGATACAAA TGGGCTTAGG TGTAATCGGG TCGGGTAGTG 
850
AGGATCATCA CGGGTATGGT CCTTATGGTG TGACTTCTTC ACTAGAGGAG 
900
ATGTCAAGCT GGCTTGCTCC GATGTCTACC ACACCTGGTG GACCATTAGC 
950
GGAGATACTG AGGCCGAGTA CGAATTTGGC GATCTCTGGT GATATCGAAT 
1000
CGTATAGCTT GATGGAGACT CCCACTCCAA GCTCGTCCCC GTCTAGAGTG 
1050
ATGAAGAAGA TGACTAGTTC AGTGTCCGAC GAAAGCAGCC AGGTTTAG
1100

>AT5G53660.1 longest ORF length:365
MDFLKVSDKT TIPYRSDSLF SLNQQQYKES SFGFRDMEIH PHPTPYAGNG 
50
LLGCYYYYPF TNAQLKELER QAMIYKYMIA SIPVPFDLLV SSPSSASPCN 
100
NKNIAGDLEP GRCRRTDGKK WRCAKEVVSN HKYCEKHLHR GRPRSRKHVE 
150
PPYSRPNNNG GSVKNRDLKK LPQKLSSSSI KDKTLEPMEV SSSISNYRDS 
200
RGSEKFTVLA TTEQENKYLN FIDVWSDGVR SSEKQSTTST PVSSSNGNLS 
250
LYSLDLSMGG NNLMGQDEMG LIQMGLGVIG SGSEDHHGYG PYGVTSSLEE 
300
MSSWLAPMST TPGGPLAEIL RPSTNLAISG DIESYSLMET PTPSSSPSRV 
350
MKKMTSSVSD ESSQV
400