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| Locus | Common name | Short description |
| AT5G53950 | ATCUC2, CUC2, ANAC098 | CUP-SHAPED COTYLEDON 2, Arabidopsis NAC domain containing protein 98, NAC (No Apical Meristem) domain transcriptional regulator superfamily protein (.1) |
>AT5G53950.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, EcoRI, EcoRV, HindIII, KpnI, NdeI, NotI, PacI, PstI, PvuII, SalI, SpeI, XhoI
| Name | Recognition sequence | Cut positions |
| BamHI | G|GATCC | 681 |
| BglII | A|GATCT | 317 |
| HpaI | GTT|AAC | 829 |
| NcoI | C|CATGG | 27 |
| NheI | G|CTAGC | 517 |
| SacI | GAGCT|C | 85, 383 |
| SmaI | CCC|GGG | 187 |
| StyI | C|C[AT][AT]GG | 27, 175, 470, 815, 1014 |
| XbaI | T|CTAGA | 895 |
Click here to view TAIR data
>AT5G53950.1 length:1128
ATGGACATTC CGTATTACCA CTACGACCAT GGCGGAGACA GCCAATATCT | 50 |
TCCACCGGGT TTCAGGTTTC ATCCCACGGA CGAAGAGCTC ATCACTCATT | 100 |
ACCTTCTCCG CAAAGTCCTC GACGGTTGCT TCTCAAGCCG TGCCATCGCA | 150 |
GAAGTTGATC TCAACAAGTG TGAGCCTTGG CAACTTCCCG GGAGAGCTAA | 200 |
GATGGGAGAG AAAGAATGGT ACTTCTTTAG CCTCCGTGAC CGGAAGTATC | 250 |
CGACGGGACT GAGAACTAAC AGAGCAACTG AGGCTGGTTA CTGGAAAGCT | 300 |
ACCGGAAAAG ACAGAGAGAT CTTTAGTTCA AAGACTTGTG CACTTGTTGG | 350 |
GATGAAGAAG ACTCTTGTCT TTTACAAAGG AAGAGCTCCG AAAGGAGAGA | 400 |
AGAGTAATTG GGTTATGCAT GAATATCGTC TTGAAGGCAA ATTCTCTTAC | 450 |
CATTTCATCT CAAGAAGCTC CAAGGATGAA TGGGTGATCT CTAGGGTTTT | 500 |
CCAGAAAACC ACTTTAGCTA GCACCGGAGC CGTCTCCGAA GGAGGAGGAG | 550 |
GAGGAGGAGC AACTGTGAGC GTAAGCAGCG GTACTGGTCC ATCTAAAAAG | 600 |
ACGAAAGTAC CCTCAACAAT CTCAAGAAAC TATCAAGAAC AACCAAGCTC | 650 |
TCCTTCCTCC GTCTCACTCC CACCTCTCCT GGATCCGACC ACTACCCTCG | 700 |
GCTACACCGA CAGCAGTTGC TCCTACGACA GCCGTAGCAC CAACACAACC | 750 |
GTCACAGCCA GCGCAATAAC CGAGCACGTG TCCTGTTTCT CCACTGTCCC | 800 |
TACTACTACT ACGGCCTTGG GCTTAGACGT TAACTCATTC AGCCGTCTTC | 850 |
CACCGCCGCT AGGGTTTGAC TTTGACCCTT TTCCTCGTTT CGTTTCTAGA | 900 |
AACGTCTCGA CTCAATCTAA CTTCAGATCG TTCCAAGAAA ACTTCAATCA | 950 |
ATTTCCTTAC TTTGGATCGT CTTCTGCATC GACTATGACC TCCGCCGTTA | 1000 |
ATCTGCCTTC TTTCCAAGGC GGCGGAGGCG TCTCCGGGAT GAATTACTGG | 1050 |
CTACCGGCGA CTGCCGAAGA GAATGAGTCA AAGGTCGGTG TGCTTCATGC | 1100 |
TGGACTTGAC TGTATTTGGA ACTACTGA | 1150 |
>AT5G53950.1 longest ORF length:375
MDIPYYHYDH GGDSQYLPPG FRFHPTDEEL ITHYLLRKVL DGCFSSRAIA | 50 |
EVDLNKCEPW QLPGRAKMGE KEWYFFSLRD RKYPTGLRTN RATEAGYWKA | 100 |
TGKDREIFSS KTCALVGMKK TLVFYKGRAP KGEKSNWVMH EYRLEGKFSY | 150 |
HFISRSSKDE WVISRVFQKT TLASTGAVSE GGGGGGATVS VSSGTGPSKK | 200 |
TKVPSTISRN YQEQPSSPSS VSLPPLLDPT TTLGYTDSSC SYDSRSTNTT | 250 |
VTASAITEHV SCFSTVPTTT TALGLDVNSF SRLPPPLGFD FDPFPRFVSR | 300 |
NVSTQSNFRS FQENFNQFPY FGSSSASTMT SAVNLPSFQG GGGVSGMNYW | 350 |
LPATAEENES KVGVLHAGLD CIWNY | 400 |