|
|
|
|
|
|
|
|
| Locus | Common name | Short description |
| AT5G54360 | C2H2-like zinc finger protein (.1) |
>AT5G54360.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, HindIII, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
| Name | Recognition sequence | Cut positions |
| EcoRV | GAT|ATC | 760 |
| NcoI | C|CATGG | 540 |
| StyI | C|C[AT][AT]GG | 221, 285, 420, 540 |
Click here to view TAIR data
>AT5G54360.1 length:813
ATGAACAACC AATCTATGTC TTCTTCAAGC TCCTCCTCCC CACACAAACA | 50 |
TGATCAAAAA CTCAAAAGTG CCCTTGTGGC CGTGGAGGAG AAGGAGACAA | 100 |
TAAACAATCC GAAACAAAGG TCTCCTCAAG AGATTGTGTC TGAAAGGACA | 150 |
AACCTTGAGA TGCCTAGTTT CAGATTAAGT TTTTTCCGAA AGAAAAGAGA | 200 |
TACCGTGCTA ATACATCCTC CCAAGGATAA CAAGATCAGC CACACCTGTC | 250 |
GTTTCTGCAA GAGGAATTTC AAAAGCTGTT TTGCCCTAGG CGGTCACATG | 300 |
AAGTGCCACA AAAAGGAACG AGAATTGGAG AAGCAGCGAA AGATAATCGA | 350 |
GGATGCGATG CTTTGTGATA GTACTCCTTT CACCTTGCAA AGGCTTCCTG | 400 |
TTGGCCCTTG TAAGTATGGC CAAGGTGGTA GCTCACATGC TTTATCAACT | 450 |
GATGGTATTA ATCTTGATCT AACTCTTGGT CCATCCAAGT CCACAGGAGG | 500 |
CAGCAACAAT AGCACTAATA ACAACACTAA CTCATCGTTC CATGGGAATC | 550 |
TAATGACTCC CGTGGGTCCT TGTGTGCCTA GATACAGTTT GGTTGCTGGA | 600 |
AACCAGGTTG ATTCAAGCAA TATACATGTT CCTGCTTATC CAACCACCGA | 650 |
TCTTTGTTAT GATTTTTTTG CTTTACAAGA GCATGGTTCG GGCTCTAGTC | 700 |
ACTCAAAAAG TCTCATCTCA AAGGGGAAAA ACAAAGTCAT GGTGCCTGAA | 750 |
GATGATGAGG ATATCGGGAT GATAAGGTGG TTGCCCAAGA AAAAAAGATC | 800 |
AAGAGGAGAG TAG | 850 |
>AT5G54360.1 longest ORF length:270
MNNQSMSSSS SSSPHKHDQK LKSALVAVEE KETINNPKQR SPQEIVSERT | 50 |
NLEMPSFRLS FFRKKRDTVL IHPPKDNKIS HTCRFCKRNF KSCFALGGHM | 100 |
KCHKKERELE KQRKIIEDAM LCDSTPFTLQ RLPVGPCKYG QGGSSHALST | 150 |
DGINLDLTLG PSKSTGGSNN STNNNTNSSF HGNLMTPVGP CVPRYSLVAG | 200 |
NQVDSSNIHV PAYPTTDLCY DFFALQEHGS GSSHSKSLIS KGKNKVMVPE | 250 |
DDEDIGMIRW LPKKKRSRGE | 300 |