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| Locus | Common name | Short description |
| AT5G56860 | GATA21, GNC | GATA, nitrate-inducible, carbon metabolism-involved, GATA TRANSCRIPTION FACTOR 21, GATA type zinc finger transcription factor family protein (.1) |
>AT5G56860.1 CDS map
>>Show genomic map
Uncut enzymes: AatII, Acc65I, AccIII(BspMII), AclI, AfeI, AflII, AgeI, AhdI, AlwI, AlwNI, Aor51HI(Eco47III), ApaI, ApaLI, AscI, AseI, AvrII, BaeI, BanII, BbsI, BbvCI, BbvI, BcgI, BciVI, BfaI, BmrI, BpmI, BsaAI, BsaBI, BsaHI, BsaI, BsaWI, BsaXI, BseRI, BsgI, BsiHKAI, BsiWI, BsmAI, BsmBI, BsmFI, BsmI, Bsp1286I, BspDI, BspEI, BspHI, BspMI, BsrBI, BsrDI, BsrGI, BsrI, BssHII, BssSI, BstAPI, BstBI, BstEII, BstF5I, BstXI, Bsu36I, BtrI, BtsI, ClaI, DraI, EarI, EciI, EcoNI, EcoRI, EcoRV, FauI, FokI, FseI, FspI, HgaI, HincII, HindIII, HpaI, HphI, I-CeuI, I-SceI, KasI, KpnI, MboII, MfeI, MluI, MlyI, MnlI, N.BstNBI, , NarI, NciI, NcoI, NdeI, NheI, NruI, NsiI, PI-PspI, PI-SceI(VDE), PacI, PflFI, PleI, PmeI, PmlI, PshAI, PsiI, PspOMI, PvuI, PvuII, RsaI, RsrII, SacI, SalI, SapI, SbfI, ScaI, SexAI, SfaNI, SfiI, SfoI, SgrAI, SmaI, SnaBI, SpeI, SspI, StuI, SwaI, Tsp45I, TspRI, Tth111I, XbaI, XmaI, XmnI
| Name | Recognition sequence | Cut positions |
| AccI | GT|[AC][TG]AC | 773 |
| AccII(FnuDII) | CG|CG | 619, 808 |
| AciI | C|CGC | 618, 798, 807, 813, 866 |
| AflIII | A|CPuPyGT | 213 |
| AluI | AG|CT | 486, 1106, 1111 |
| ApoI | Pu|AATTPy | 9, 1069 |
| AvaI | C|PyCGPuG | 740, 851 |
| AvaII | G|G[AT]CC | 735, 744 |
| BalI | TGG|CCA | 944 |
| BamHI | G|GATCC | 79 |
| BanI | G|GPyPuCC | 321 |
| BclI | T|GATCA | 191, 243, 458, 495, 528 |
| BglI | GCCNNNN|NGGC | 804 |
| BglII | A|GATCT | 27, 579 |
| BlpI | GC|TNAGC | 1110 |
| BsaJI | C|CNNGG | 614, 809, 947 |
| BsiEI | CGPuPy|CG | 617, 812 |
| BslI | CCNNNNN|NNGG | 430, 836 |
| BsoBI | C|PyCGPuG | 740, 851 |
| BspT107I(HgiCI) | G|G[TC][AG]CC | 321 |
| BsrFI | Pu|CCGGPy | 823 |
| BssKI | |CCNGG | 604 |
| BstNI | CC|[AT]GG | 604 |
| BstUI | CG|CG | 619, 808 |
| BstYI | Pu|GATCPy | 27, 79, 579 |
| BstZ17I | GTA|TAC | 773 |
| BtgI | C|CPuPyGG | 614, 809 |
| Cac8I | GCN|NGC | 307, 795, 823 |
| Cfr10I | [AG]|CCGG[TC] | 823 |
| DdeI | C|TNAG | 1109 |
| DpnI | GA-CH3|TC | 26, 38, 78, 190, 206, 242, 297, 311, 365, 457, 494, 527, 566, 578, 900, 964, 1021 |
| DpnII | |GATC | 26, 38, 78, 190, 206, 242, 297, 311, 365, 457, 494, 527, 566, 578, 900, 964, 1021 |
| DraIII | CACNNN|GTG | 319 |
| DrdI | GACNNNN|NNGTC | 743 |
| EaeI | Py|GGCCPu | 617, 806, 812, 944 |
| EagI | C|GGCCG | 617, 812 |
| EcoO109I | PuG|GNCCPy | 745 |
| Fnu4HI | GC|NGC | 618, 798, 807, 813, 819, 1149 |
| HaeII | PuGCGC|Py | 846 |
| HaeIII | GG|CC | 271, 616, 805, 811, 943, 949 |
| HhaI | GCG|C | 845 |
| HinP1I | G|CGC | 845 |
| HinfI | G|ANTC | 3, 414, 420, 542, 632, 716, 1014 |
| HpaII | C|CGG | 822, 1008 |
| Hpy188I | TCN|GA | 417, 423, 497, 696, 1017 |
| Hpy99I | CG[AT]CG| | 560 |
| HpyCH4III | ACN|GT | 292, 658, 1002, 1189 |
| HpyCH4IV | A|CGT | 594 |
| HpyCH4V | TG|CA | 817, 855, 882, 959 |
| MboI | |GATC | 26, 38, 78, 190, 206, 242, 297, 311, 365, 457, 494, 527, 566, 578, 900, 964, 1021 |
| MscI | TGG|CCA | 944 |
| MseI | T|TAA | 30, 582 |
| MslI | CAPyNN|NNPuTG | 306 |
| MspA1I | C[AC]G|C[GT]G | 809, 815, 868 |
| MspI | C|CGG | 822, 1008 |
| MwoI | GCNNNNN|NNGC | 795, 807, 819, 854 |
| NaeI | GCC|GGC | 823 |
| NgoMIV | G|CCGGC | 823 |
| NlaIII | CATG| | 212, 306, 316, 572, 765, 1162 |
| NlaIV | GGN|NCC | 79, 321, 745 |
| NotI | GC|GGCCGC | 813 |
| NspI | PuCATG|Py | 213, 307, 766 |
| PaeR7I | C|TCGAG | 740 |
| PciI | A|CATGT | 213 |
| PflMI | CCANNNN|NTGG | 836 |
| PpuMI | PuG|G[AT]CCPy | 745 |
| PspGI | |CC[AT]GG | 604 |
| PstI | CTGCA|G | 818 |
| SacII | CCGC|GG | 809 |
| Sau3AI | |GATC | 26, 38, 78, 190, 206, 242, 297, 311, 365, 457, 494, 527, 566, 578, 900, 964, 1021 |
| Sau96I | G|GNCC | 735, 744 |
| ScrFI | CC|NGG | 604 |
| SfcI | C|TPuPyAG | 818 |
| SmlI | C|TPyPuAG | 200, 268, 740 |
| SphI | GCATG|C | 307 |
| StyI | C|C[AT][AT]GG | 947 |
| Taqƒ¿I | T|CGA | 20, 558, 739, 1052, 1077 |
| TfiI | G|A[AT]TC | 3, 414, 542, 632, 1014 |
| TliI | C|TCGAG | 740 |
| TseI | G|C[AT]GC | 816, 1149 |
| Tsp509I | |AATT | 8, 134, 554, 584, 861, 1046, 1068 |
| XcmI | CCANNNNN|NNNNTGG | 284 |
| XhoI | C|TCGAG | 740 |
Click here to view TAIR data
>AT5G56860.1 length:1197
ATGGATTCAA ATTTTCATTA CTCGATAGAT CTTAACGAAG ATCAAAACCA | 50 |
TCACGAACAA CCCTTTTTCT ATCCTCTTGG ATCCTCTTCC TCGCTTCATC | 100 |
ATCATCATCA TCATCATCAT CATCAAGTCC CTTCTAATTC TTCATCTTCT | 150 |
TCTTCGTCCA TTTCATCGCT CTCCTCTTAC CTCCCTTTCT TGATCAACTC | 200 |
TCAAGAAGAT CAACATGTTG CCTACAACAA CACTTATCAC GCTGATCATC | 250 |
TCCATCTTTC TCAACCCCTC AAGGCCAAGA TGTTTGTGGC TAACGGTGGA | 300 |
TCATCAGCAT GCGATCACAT GGTGCCAAAG AAGGAGACAA GACTGAAACT | 350 |
AACGATAAGG AAAAAAGATC ACGAAGACCA ACCCCATCCT CTTCATCAAA | 400 |
ACCCGACAAA ACCCGATTCA GACTCCGACA AGTGGTTGAT GTCCCCAAAG | 450 |
ATGCGGTTGA TCAAGAAAAC AATCACCAAC AATAAACAGC TCATTGATCA | 500 |
GACTAATAAT AATAATCATA AAGAAAGTGA TCACTACCCT TTGAATCATA | 550 |
AGACTAATTT CGACGAGGAT CACCATGAAG ATCTTAATTT CAAGAACGTC | 600 |
TTGACCAGGA AGACCACGGC CGCGACCACC GAGAATCGCT ACAATACAAT | 650 |
CAACGAGAAC GGTTATAGTA ATAACAATGG CGTGATTAGG GTTTGTTCGG | 700 |
ATTGTAACAC CACCAAGACT CCTCTTTGGC GAAGTGGACC TCGAGGTCCC | 750 |
AAGTCTCTTT GTAACGCATG TGGTATACGG CAAAGAAAGG CAAGGCGAGC | 800 |
CGCTATGGCC GCGGCCGCTG CAGCCGGCGA CCAAGAGGTG GCGGTAGCGC | 850 |
CCCGAGTGCA ACAATTACCG CTGAAAAAGA AGTTGCAAAA TAAAAAAAAG | 900 |
AGATCAAACG GAGGGGAAAA ATACAATCAC TCTCCTCCAA TGGTGGCCAA | 950 |
GGCCAAAAAG TGCAAGATCA AAGAGGAAGA GGAGAAGGAA ATGGAAGCGG | 1000 |
AAACGGTTGC CGGAGATTCA GAGATCAGCA AATCTACAAC TTCTTCTAAT | 1050 |
TCTTCGATTT CGTCAAACAA ATTTTGCTTC GATGATTTGA CAATAATGTT | 1100 |
GAGCAAAAGC TCAGCTTATC AACAAGTGTT CCCACAAGAT GAGAAGGAGG | 1150 |
CTGCTGTTTT GCTCATGGCT CTGTCGTATG GAATGGTTCA CGGTTGA | 1200 |
>AT5G56860.1 longest ORF length:398
MDSNFHYSID LNEDQNHHEQ PFFYPLGSSS SLHHHHHHHH HQVPSNSSSS | 50 |
SSSISSLSSY LPFLINSQED QHVAYNNTYH ADHLHLSQPL KAKMFVANGG | 100 |
SSACDHMVPK KETRLKLTIR KKDHEDQPHP LHQNPTKPDS DSDKWLMSPK | 150 |
MRLIKKTITN NKQLIDQTNN NNHKESDHYP LNHKTNFDED HHEDLNFKNV | 200 |
LTRKTTAATT ENRYNTINEN GYSNNNGVIR VCSDCNTTKT PLWRSGPRGP | 250 |
KSLCNACGIR QRKARRAAMA AAAAAGDQEV AVAPRVQQLP LKKKLQNKKK | 300 |
RSNGGEKYNH SPPMVAKAKK CKIKEEEEKE MEAETVAGDS EISKSTTSSN | 350 |
SSISSNKFCF DDLTIMLSKS SAYQQVFPQD EKEAAVLLMA LSYGMVHG | 400 |