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| Locus | Common name | Short description |
| AT5G56930 | EMB1789 | embryo defective 1789, CCCH-type zinc finger family protein (.1) |
>AT5G56930.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BglII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PvuII, SmaI, XbaI
| Name | Recognition sequence | Cut positions |
| BamHI | G|GATCC | 903 |
| EcoRI | G|AATTC | 1870 |
| EcoRV | GAT|ATC | 708 |
| HindIII | A|AGCTT | 590, 1698 |
| PstI | CTGCA|G | 1355, 1865 |
| SacI | GAGCT|C | 986 |
| SalI | G|TCGAC | 1067 |
| SpeI | A|CTAGT | 814 |
| StyI | C|C[AT][AT]GG | 1005 |
| XhoI | C|TCGAG | 84, 1990 |
Click here to view TAIR data
>AT5G56930.1 length:2028
ATGGAATCTT CCGTCGCTCC GTTTCCTCAC CGACGCACGC ATCTGCCGAA | 50 |
TCGAAATTAT CGCTCTTTGC TTTATCACTT TTGCTCGAGT TTCGATCGGG | 100 |
AGCCTCAAAT TTCTCTTGCC ACACCGGCAG TTCTCCAGGA GCTGGTCTTA | 150 |
CGAACAGAAA TTGCTCAAGA GTCTCCGGGA GAAACTTGCG AACCGCCGGA | 200 |
GAATTTATCA ATTACGGAAT CAAAACTCAA TGGAGTGTCT GGTGATTCAA | 250 |
GTGGTGAGAA GGTGGAAACA ATTTCACAGG AAAAGAGTTT GATGCTTGGA | 300 |
GATATTTGTG ATGGAATTGA CTTGCAAGAT GCATCTGTTG TTAGTAGACA | 350 |
CACAGATTTT TTCGATAGCT TTGAGCTTAT GATTAATGAA ACTCAAGATT | 400 |
CTGTTCCAGA AAGTTGTGTG AATCTCTTTG AGGCATTGGA TGTGAATGAC | 450 |
TATGACATTG TCCAAAATGT CCTGGAGAAG CCTAATATTG CAACTCAAGT | 500 |
TCAAGTAGAT CCAGTTGAAA GTGAGAAAAA GGCAGAGGAG GTTCCTAAAT | 550 |
CTGTTGAATC TAATGAGGTT ATAAGTTCTG GAGTTTTGGA AGCTTGTAAT | 600 |
GGAACAGTTC AAAGAGAGAT GGAATTAGAG AAACCTGTTG ATAATAGTCC | 650 |
GGTTTTGGTA GATTCTGTGT CTCGGATAGT TGGAGGTGAT GATGTAGAAG | 700 |
AAGGAGAGAT ATCAGGGGAT GATAATGATG ATATGCTTGT AGAAGATGAT | 750 |
GAAACAGTCG AAAGACATGA GGAGTATCAG GTCTCACAAG ATGGAACTGG | 800 |
TAATAGCCAT CTCACTAGTC ATAAGAGTTT TGGTGTTGAG GTAATGAATG | 850 |
TAGATAATCA AGCCAAGAAG ATTGATCAAA CTTTCAGTAA CGAAGCAAAG | 900 |
ATGGATCCTG GAACCTCCAT CAAAAAAAGG TCTGCGCCTT CTAAGGATGC | 950 |
AAAAGCCAGA AAGAGGGCAA AAGCTAGGAT AAAAAGAGCT CAAGAGCGTA | 1000 |
TAGCCCTTGG CGTGAAAAAG CTGAAACTGA AACCAGTAGC TCCAAAACCA | 1050 |
AAGCCTATCA AGTATTGTCG ACACTATCTC AAGGGGCGGT GCCATGAGGG | 1100 |
AGATAAATGC AAATTTTCAC ATGATACAAT ACCGGAAACC AAATGTTCGC | 1150 |
CTTGCTGCTA CTTTGCAACC CAGTCATGTA TGAAAGGAGA TGATTGTCCT | 1200 |
TTCGACCATG ATCTCTCCAA ATACCCTTGC AATAATTTCA TTACTAAAGG | 1250 |
TTTCTGCTAC AGGGGTGATA GTTGTTTGTT TTCGCATAAG GGTACTCCAC | 1300 |
AATCTGCTTC AGACACGCCG AGTGCAAATG TAACAGTCTC GTCTACTAAG | 1350 |
ATCACTGCAG CGTCTTTCTC GCCTCAGAAA ACAAAAAAAC AATCCGTGAG | 1400 |
AGATGCCATA GCCAAATTAC CGGCGATCCA AGCAAGAGTT TCAAGCTCTG | 1450 |
TTGCGTTTTT GAAGCCCTCA AGTCATTCTA ACCAACGAAA CTCATCTGAT | 1500 |
GCATCATCTT CAAAGATCAA TGAACATGTA ACGCCTCCAC AGGTTCCTCC | 1550 |
TTTGAGAAAA CCATCCGTTG CTCCAAAGGG TATGAGTTTT CTCTCTTTAG | 1600 |
ACAAAACCTC ACAAGAGGAT ACGGTGAAAG CGTCTTCTGC GTCCAAGCCA | 1650 |
AACACAGACA ACTCTGATAG TCAGACATTG AAGCAGTCAC AACAGGGAAG | 1700 |
CTTTCTCCCT CTGGGGCCTC CAAAAGGAAT AAGTTTCTTA TCATTTGCAT | 1750 |
CAGAAGAACA AAAAACTCTG AATCGAGAGC CTCAAAAACC AGCAAGTAGT | 1800 |
AAAAATCTCA AGACTACGCC TAGCTCACAC ATTCAAAGTT CTCTACTCTC | 1850 |
AGCCATGAAA CTCGCTGCAG AATTCGAATC CGCTAAAGTT GAACGAGGCA | 1900 |
ACAATGATCC AACAGAAGCT GTAAATAAGA GCAATGTTAC TGTTGACACG | 1950 |
GCTGTAACCA GAAACTCAGG GAACATATCT TCCAAGATTC TCGAGTTCTT | 2000 |
GTCGAGCTTC AGCCACGGCA AAAACTGA | 2050 |
>AT5G56930.1 longest ORF length:675
MESSVAPFPH RRTHLPNRNY RSLLYHFCSS FDREPQISLA TPAVLQELVL | 50 |
RTEIAQESPG ETCEPPENLS ITESKLNGVS GDSSGEKVET ISQEKSLMLG | 100 |
DICDGIDLQD ASVVSRHTDF FDSFELMINE TQDSVPESCV NLFEALDVND | 150 |
YDIVQNVLEK PNIATQVQVD PVESEKKAEE VPKSVESNEV ISSGVLEACN | 200 |
GTVQREMELE KPVDNSPVLV DSVSRIVGGD DVEEGEISGD DNDDMLVEDD | 250 |
ETVERHEEYQ VSQDGTGNSH LTSHKSFGVE VMNVDNQAKK IDQTFSNEAK | 300 |
MDPGTSIKKR SAPSKDAKAR KRAKARIKRA QERIALGVKK LKLKPVAPKP | 350 |
KPIKYCRHYL KGRCHEGDKC KFSHDTIPET KCSPCCYFAT QSCMKGDDCP | 400 |
FDHDLSKYPC NNFITKGFCY RGDSCLFSHK GTPQSASDTP SANVTVSSTK | 450 |
ITAASFSPQK TKKQSVRDAI AKLPAIQARV SSSVAFLKPS SHSNQRNSSD | 500 |
ASSSKINEHV TPPQVPPLRK PSVAPKGMSF LSLDKTSQED TVKASSASKP | 550 |
NTDNSDSQTL KQSQQGSFLP LGPPKGISFL SFASEEQKTL NREPQKPASS | 600 |
KNLKTTPSSH IQSSLLSAMK LAAEFESAKV ERGNNDPTEA VNKSNVTVDT | 650 |
AVTRNSGNIS SKILEFLSSF SHGKN | 700 |