fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G57150 bHLH035 basic helix-loop-helix (bHLH) DNA-binding superfamily protein

>AT5G57150.3 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
EcoRV GAT|ATC 7
SalI G|TCGAC 13


Click here to view TAIR data

>AT5G57150.3 length:660
ATGGAGGATA TCGTCGACCA AGAATTAAGC AATTACTGGG AACCTAGCTC 
50
CTTCCTCCAA AACGAAGACT TCGAATACGA CAGAAGCTGG CCTTTGGAAG 
100
AAGCCATTTC TGGGTCGTAT GATTCGAGTT CGCCGGATGG AGCTGCTTCG 
150
TCGCCGGCTT CTAAGAATAT TGTGTCGGAG AGAAACAGAA GACAGAAACT 
200
TAACCAGAGA CTCTTCGCTC TTCGATCAGT TGTTCCCAAT ATCACTAAGA 
250
TGGATAAAGC CTCAATAATC AAAGATGCTA TTAGTTACAT AGAAGGATTA 
300
CAATATGAAG AAAAGAAGCT CGAAGCTGAG ATCAGAGAAC TTGAATCTAC 
350
ACCAAAGAGT AGCCTTAGTT TCAGCAAAGA TTTTGATCGT GATTTACTTG 
400
TTCCTGTCAC ATCCAAGAAG ATGAAGCAGC TTGATTCTGG TTCTTCCACT 
450
TCTCTCATCG AAGTTCTCGA ATTGAAGGTA ACATTCATGG GAGAGAGGAC 
500
AATGGTGGTG AGTGTAACAT GTAATAAGAG GACAGATACA ATGGTGAAAC 
550
TGTGTGAAGT CTTTGAGTCA TTGAATCTCA AAATCCTCAC TTCCAATCTC 
600
ACCTCTTTCT CTGGCATGAT CTTCCACACT GTCTTTATTG AGATTGCAAT 
650
TGCTAATTAA 
700

>AT5G57150.3 longest ORF length:219
MEDIVDQELS NYWEPSSFLQ NEDFEYDRSW PLEEAISGSY DSSSPDGAAS 
50
SPASKNIVSE RNRRQKLNQR LFALRSVVPN ITKMDKASII KDAISYIEGL 
100
QYEEKKLEAE IRELESTPKS SLSFSKDFDR DLLVPVTSKK MKQLDSGSST 
150
SLIEVLELKV TFMGERTMVV SVTCNKRTDT MVKLCEVFES LNLKILTSNL 
200
TSFSGMIFHT VFIEIAIAN
250