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| Locus | Common name | Short description |
| AT5G57390 | PLT5, EMK, CHO1, AIL5 | PLETHORA 5, EMBRYOMAKER, CHOTTO 1, AINTEGUMENTA-like 5 (.1) |
>AT5G57390.1 CDS map
>>Show genomic map
Uncut enzymes: AatII, Acc65I, AccIII(BspMII), AclI, AfeI, AflIII, AhdI, AlwI, Aor51HI(Eco47III), ApaI, ApaLI, AscI, AvaI, BaeI, BalI, BamHI, BbsI, BbvCI, BbvI, BcgI, BciVI, BglI, BlpI, BmrI, BpmI, BsaAI, BsaI, BsaXI, BseRI, BsgI, BsiEI, BsiWI, BsmAI, BsmBI, BsmFI, BsmI, BsoBI, BspDI, BspEI, BspHI, BspMI, BsrBI, BsrDI, BssHII, BssSI, BstBI, BstF5I, BstXI, Bsu36I, BtrI, ClaI, DraI, DraIII, DrdI, EaeI, EagI, EarI, EciI, EcoNI, EcoRI, FauI, FokI, FseI, FspI, HaeII, HgaI, HhaI, HinP1I, HincII, HpaI, HphI, I-CeuI, I-SceI, KasI, KpnI, MboII, MluI, MlyI, MnlI, MscI, NaeI, , NarI, NdeI, NgoMIV, NotI, NruI, NsiI, NspI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PciI, PflFI, PflMI, PleI, PmeI, PmlI, PsiI, PspOMI, PvuI, PvuII, RsrII, SalI, SapI, SbfI, ScaI, SexAI, SfaNI, SfiI, SfoI, SgrAI, SmaI, SnaBI, SpeI, SphI, SspI, StuI, SwaI, TliI, Tth111I, XbaI, XcmI, XhoI, XmaI, XmnI
| Name | Recognition sequence | Cut positions |
| AccI | GT|[AC][TG]AC | 286, 1292 |
| AccII(FnuDII) | CG|CG | 1058 |
| AciI | C|CGC | 407, 423, 462, 1057, 1167, 1500, 1529 |
| AflII | C|TTAAG | 769 |
| AgeI | A|CCGGT | 1254, 1656 |
| AluI | AG|CT | 35, 205, 447, 467, 541, 649, 742, 748, 763, 1021, 1030, 1118 |
| AlwNI | CAGNNN|CTG | 1175 |
| ApoI | Pu|AATTPy | 1054 |
| AseI | AT|TAAT | 1594 |
| AvaII | G|G[AT]CC | 297, 780, 1327 |
| AvrII | C|CTAGG | 474 |
| BanI | G|GPyPuCC | 904 |
| BanII | GPuGCPy|C | 448 |
| BclI | T|GATCA | 1317 |
| BfaI | C|TAG | 33, 465, 473, 510, 539, 744, 897, 927, 1116 |
| BglII | A|GATCT | 434 |
| BsaBI | GATNN|NNATC | 170 |
| BsaHI | GPu|CGPyC | 922 |
| BsaJI | C|CNNGG | 269, 291, 318, 474, 1059, 1266 |
| BsaWI | [AT]|CCGG[AT] | 487, 1254, 1656 |
| BsiHKAI | G[AT]GC[AT]|C | 448 |
| BslI | CCNNNNN|NNGG | 1137, 1413, 1662 |
| Bsp1286I | G[GAT]GC[CAT]|C | 448 |
| BspT107I(HgiCI) | G|G[TC][AG]CC | 904 |
| BsrFI | Pu|CCGGPy | 1254, 1431, 1656 |
| BsrGI | T|GTACA | 914 |
| BsrI | ACTGGN| | 86, 637, 1288, 1589 |
| BssKI | |CCNGG | 246, 291, 1310, 1346, 1413, 1514 |
| BstAPI | GCANNNN|NTGC | 362 |
| BstEII | G|GTNACC | 243 |
| BstNI | CC|[AT]GG | 1346, 1413 |
| BstUI | CG|CG | 1058 |
| BstYI | Pu|GATCPy | 434, 1395 |
| BstZ17I | GTA|TAC | 286, 1292 |
| BtgI | C|CPuPyGG | 269, 1059, 1266 |
| BtsI | GCAGTGNN| | 889 |
| Cac8I | GCN|NGC | 466, 954, 976, 1117 |
| Cfr10I | [AG]|CCGG[TC] | 1254, 1431, 1656 |
| DdeI | C|TNAG | 445, 548, 1520 |
| DpnI | GA-CH3|TC | 164, 433, 1048, 1190, 1316, 1394 |
| DpnII | |GATC | 164, 433, 1048, 1190, 1316, 1394 |
| EcoO109I | PuG|GNCCPy | 781 |
| EcoRV | GAT|ATC | 807 |
| Fnu4HI | GC|NGC | 376, 426, 462, 741, 762, 1023, 1044, 1170, 1503 |
| HaeIII | GG|CC | 683 |
| HindIII | A|AGCTT | 206, 1031 |
| HinfI | G|ANTC | 42, 441, 533, 616, 819, 848, 892, 1206, 1342 |
| HpaII | C|CGG | 245, 291, 486, 1253, 1310, 1430, 1514, 1655 |
| Hpy188I | TCN|GA | 162, 393, 444, 501, 549, 566, 822, 1203, 1392, 1479 |
| Hpy99I | CG[AT]CG| | 337, 499 |
| HpyCH4III | ACN|GT | 1185, 1226, 1558 |
| HpyCH4IV | A|CGT | 576, 595, 1235 |
| HpyCH4V | TG|CA | 354, 363, 760, 973, 1024, 1069, 1437, 1504, 1624, 1647 |
| MboI | |GATC | 164, 433, 1048, 1190, 1316, 1394 |
| MfeI | C|AATTG | 1112 |
| MseI | T|TAA | 768, 872, 1593 |
| MslI | CAPyNN|NNPuTG | 941 |
| MspA1I | C[AC]G|C[GT]G | 1059, 1172, 1502, 1531 |
| MspI | C|CGG | 245, 291, 486, 1253, 1310, 1430, 1514, 1655 |
| MwoI | GCNNNNN|NNGC | 362, 747, 1006, 1029, 1170, 1436 |
| N.BstNBI | GAGTCNNNN|N | 621 |
| NciI | CC|[CG]GG | 246, 291, 1310, 1514 |
| NcoI | C|CATGG | 1266 |
| NheI | G|CTAGC | 466, 1117 |
| NlaIII | CATG| | 844, 910, 941, 1265 |
| NlaIV | GGN|NCC | 328, 780, 904 |
| PpuMI | PuG|G[AT]CCPy | 781 |
| PshAI | GACNN|NNGTC | 498, 1091 |
| PspGI | |CC[AT]GG | 1346, 1413 |
| PstI | CTGCA|G | 1025 |
| RsaI | GT|AC | 515, 597, 913 |
| SacI | GAGCT|C | 448 |
| SacII | CCGC|GG | 1059 |
| Sau3AI | |GATC | 164, 433, 1048, 1190, 1316, 1394 |
| Sau96I | G|GNCC | 297, 780, 1327 |
| ScrFI | CC|NGG | 246, 291, 1310, 1346, 1413, 1514 |
| SfcI | C|TPuPyAG | 400, 1025 |
| SmlI | C|TPyPuAG | 307, 451, 769, 1013 |
| StyI | C|C[AT][AT]GG | 474, 1266 |
| Taqƒ¿I | T|CGA | 225, 602, 850, 946, 1083, 1093, 1508, 1538 |
| TfiI | G|A[AT]TC | 42, 533, 819, 892, 1342 |
| TseI | G|C[AT]GC | 741, 762, 1023, 1044, 1170, 1503 |
| Tsp45I | |GT[CG]AC | 242, 618, 924, 1074 |
| Tsp509I | |AATT | 125, 797, 812, 961, 1053, 1079, 1111, 1525 |
| TspRI | NNCA[CG]TGNN| | 889, 1288 |
Click here to view TAIR data
>AT5G57390.1 length:1677
ATGAAGAACA ATAACAACAA ATCTTCTTCT TCTTCTAGCT ATGATTCTTC | 50 |
TTTGTCTCCT TCTTCTTCAT CCTCCTCCCA CCAGAACTGG CTCTCTTTCT | 100 |
CTCTCTCCAA CAATAACAAC AACTTCAATT CTTCCTCAAA CCCTAATCTC | 150 |
ACTTCCTCCA CATCAGATCA TCATCATCCT CACCCTTCTC ACCTCTCTCT | 200 |
CTTTCAAGCT TTCTCCACTT CTCCAGTCGA ACGGCAAGAT GGGTCACCGG | 250 |
GAGTTTCACC CAGCGATGCC ACGGCGGTTC TTTCCGTATA CCCCGGCGGT | 300 |
CCTAAACTTG AGAACTTCCT CGGCGGAGGA GCCTCAACGA CGACAACAAG | 350 |
ACCAATGCAA CAAGTGCAAT CTCTTGGCGG CGTTGTCTTC TCTTCCGACC | 400 |
TACAGCCACC GCTTCATCCT CCGTCCGCCG CCGAGATCTA CGACTCTGAG | 450 |
CTCAAGTCAA TAGCCGCTAG CTTCCTAGGA AACTACTCCG GTGGACACTC | 500 |
GTCGGAGGTC TCTAGCGTAC ATAAACAACA ACCGAATCCT CTAGCTGTCT | 550 |
CAGAGGCTTC GCCTACTCCG AAGAAGAACG TAGAGAGTTT TGGACAACGT | 600 |
ACCTCGATTT ATAGAGGAGT CACAAGACAT AGATGGACTG GAAGATACGA | 650 |
AGCTCATCTA TGGGATAATA GTTGCCGAAG AGAAGGCCAA AGCAGAAAAG | 700 |
GAAGACAAGT TTATTTAGGT GGTTATGATA AGGAAGATAA AGCAGCTAGA | 750 |
GCTTACGACC TTGCAGCTCT TAAGTATTGG GGTCCTACAA CTACGACTAA | 800 |
TTTCCCGATA TCAAATTACG AATCTGAACT TGAAGAAATG AAACACATGA | 850 |
CTCGACAAGA GTTCGTTGCT TCTTTAAGAC GGAAAAGCAG TGGATTCTCT | 900 |
AGGGGTGCCT CCATGTACAG AGGCGTCACT AGACATCATC AGCATGGTCG | 950 |
ATGGCAGGCA CGAATTGGAA GAGTTGCAGG CAACAAAGAC CTTTATCTTG | 1000 |
GCACATTTAG CACTCAAGAG GAAGCTGCAG AAGCTTATGA TATAGCAGCG | 1050 |
ATCAAATTCC GCGGTCTAAA TGCAGTCACC AATTTCGACA TCAGTCGATA | 1100 |
TGATGTCAAA TCAATTGCTA GCTGTAATCT CCCTGTGGGT GGACTAATGC | 1150 |
CTAAACCTTC TCCAGCAACC GCAGCGGCTG ACAAAACCGT TGATCTTTCT | 1200 |
CCATCCGACT CTCCATCTCT AACCACACCG TCCCTCACGT TCAATGTGGC | 1250 |
AACACCGGTC AATGACCATG GAGGAACTTT TTACCACACT GGTATACCAA | 1300 |
TCAAACCAGA CCCGGCTGAT CATTATTGGT CCAACATCTT TGGATTCCAG | 1350 |
GCAAACCCGA AAGCAGAAAT GCGACCATTA GCAAACTTTG GGTCGGATCT | 1400 |
TCATAACCCT TCTCCTGGTT ATGCTATAAT GCCGGTAATG CAGGAAGGTG | 1450 |
AAAACAACTT TGGTGGTAGT TTTGTTGGGT CTGATGGGTA TAACAATCAT | 1500 |
TCCGCTGCAT CGAACCCGGT CTCAGCAATT CCGCTGTCCT CGACAACTAC | 1550 |
AATGAGTAAC GGTAACGAAG GGTATGGTGG AAACATAAAC TGGATTAATA | 1600 |
ACAACATTTC AAGTTCTTAC CAAACTGCAA AATCAAATCT CTCTGTTTTG | 1650 |
CACACACCGG TTTTTGGGTT GGAATGA | 1700 |
>AT5G57390.1 longest ORF length:558
MKNNNNKSSS SSSYDSSLSP SSSSSSHQNW LSFSLSNNNN NFNSSSNPNL | 50 |
TSSTSDHHHP HPSHLSLFQA FSTSPVERQD GSPGVSPSDA TAVLSVYPGG | 100 |
PKLENFLGGG ASTTTTRPMQ QVQSLGGVVF SSDLQPPLHP PSAAEIYDSE | 150 |
LKSIAASFLG NYSGGHSSEV SSVHKQQPNP LAVSEASPTP KKNVESFGQR | 200 |
TSIYRGVTRH RWTGRYEAHL WDNSCRREGQ SRKGRQVYLG GYDKEDKAAR | 250 |
AYDLAALKYW GPTTTTNFPI SNYESELEEM KHMTRQEFVA SLRRKSSGFS | 300 |
RGASMYRGVT RHHQHGRWQA RIGRVAGNKD LYLGTFSTQE EAAEAYDIAA | 350 |
IKFRGLNAVT NFDISRYDVK SIASCNLPVG GLMPKPSPAT AAADKTVDLS | 400 |
PSDSPSLTTP SLTFNVATPV NDHGGTFYHT GIPIKPDPAD HYWSNIFGFQ | 450 |
ANPKAEMRPL ANFGSDLHNP SPGYAIMPVM QEGENNFGGS FVGSDGYNNH | 500 |
SAASNPVSAI PLSSTTTMSN GNEGYGGNIN WINNNISSSY QTAKSNLSVL | 550 |
HTPVFGLE | 600 |