Locus |
Common name |
Short description |
AT5G57420 |
IAA33 |
indole-3-acetic acid inducible 33 (.1) |
>AT5G57420.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
BglII
| A|GATCT |
423 |
EcoRI
| G|AATTC |
461 |
StyI
| C|C[AT][AT]GG |
168 |
Click here to view TAIR data
>AT5G57420.1 length:516
ATGAATAGTT TCGAGCCACA AAGCCAAGAC TCTTTGCAAA GAAGGTTTCA | 50 |
TCAAGACAAC AGCACCACAC AACAACCTCG TGACACCACG ACACCTTTCA | 100 |
TACCCAAACC GGCTTCCAAA AACCATAATA ATAGCAACTC CAGCTCTGGA | 150 |
GCGGCCGGGA GATCATTCCA AGGCTTTGGG CTTAACGTAG AGGACGATCT | 200 |
TGTTTCATCG GTGGTTCCTC CGGTTACGGT TGTGCTAGAG GGACGTTCTA | 250 |
TATGTCAACG CATAAGCCTA GACAAGCATG GGAGTTATCA GAGCTTGGCT | 300 |
TCGGCTCTAA GGCAAATGTT TGTCGATGGA GCTGATTCAA CGGACGATCT | 350 |
TGATCTGTCA AACGCCATTC CTGGCCATCT TATTGCTTAT GAAGACATGG | 400 |
AGAACGATCT CCTTCTTGCC GGAGATCTTA CTTGGAAGGA CTTTGTTCGT | 450 |
GTAGCGAAGA GAATTCGAAT CTTGCCGGTC AAGGGAAACA CAAGACAAGT | 500 |
TAAAAGAAAC GAGTGA | 550 |
>AT5G57420.1 longest ORF length:171
MNSFEPQSQD SLQRRFHQDN STTQQPRDTT TPFIPKPASK NHNNSNSSSG | 50 |
AAGRSFQGFG LNVEDDLVSS VVPPVTVVLE GRSICQRISL DKHGSYQSLA | 100 |
SALRQMFVDG ADSTDDLDLS NAIPGHLIAY EDMENDLLLA GDLTWKDFVR | 150 |
VAKRIRILPV KGNTRQVKRN E | 200 |
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