fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G57520 ATZFP2, ZFP2 zinc finger protein 2 (.1)

>AT5G57520.1 CDS map

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Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI
Name Recognition sequence Cut positions
HindIII A|AGCTT 223
StyI C|C[AT][AT]GG 145, 339
XhoI C|TCGAG 79, 363


Click here to view TAIR data

>AT5G57520.1 length:453
ATGGACTACC AGCCAAACAC ATCCCTACGT CTAAGCCTAC CAAGTTACAA 
50
GAACCACCAA CTAAACCTAG AACTTGTTCT CGAGCCTTCT TCCATGTCTT 
100
CTTCTTCATC TTCTTCCACG AACTCATCAT CATGTTTGGA GCAGCCTAGG 
150
GTATTCTCAT GTAACTATTG TCAAAGAAAG TTTTACAGCT CTCAAGCTCT 
200
TGGTGGTCAT CAAAACGCTC ATAAGCTTGA GAGAACCTTA GCCAAGAAGA 
250
GTCGAGAACT CTTTAGATCC TCAAACACTG TTGATTCTGA TCAGCCTTAC 
300
CCGTTCTCCG GTCGCTTTGA GCTTTACGGC CGTGGCTACC AAGGATTTCT 
350
CGAAAGTGGC GGCTCGAGGG ACTTCTCCGC CCGCCGTGTG CCGGAGAGTG 
400
GTCTTGATCA GGATCAGGAG AAGAGTCACC TTGACTTATC CTTAAGGCTC 
450
TAA
500

>AT5G57520.1 longest ORF length:150
MDYQPNTSLR LSLPSYKNHQ LNLELVLEPS SMSSSSSSST NSSSCLEQPR 
50
VFSCNYCQRK FYSSQALGGH QNAHKLERTL AKKSRELFRS SNTVDSDQPY 
100
PFSGRFELYG RGYQGFLESG GSRDFSARRV PESGLDQDQE KSHLDLSLRL 
150