fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G57620 ATMYB36 myb domain protein 36 (.1)

>AT5G57620.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, KpnI, NdeI, NotI, PacI, PstI, PvuII, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
EcoRV GAT|ATC 310
HindIII A|AGCTT 547, 592, 609
HpaI GTT|AAC 628
NcoI C|CATGG 46
NheI G|CTAGC 660
SacI GAGCT|C 8
StyI C|C[AT][AT]GG 46


Click here to view TAIR data

>AT5G57620.1 length:1002
ATGGGAAGAG CTCCATGCTG CGACAAGGCA AACGTGAAGA AAGGACCATG 
50
GTCACCGGAA GAAGATGTGA AGCTCAAGGA TTACATCGAC AAATATGGCA 
100
CTGGTGGCAA CTGGATCGCA CTGCCTCAGA AAATTGGGCT GAAGAGATGT 
150
GGTAAGAGTT GCAGACTGAG ATGGCTTAAT TACTTAAGAC CAAACATCAA 
200
ACATGGTGGT TTTTCTGAGG AAGAAGATAG AATCATCTTG AGTCTCTACA 
250
TTAGCATTGG AAGCCGGTGG TCCATAATTG CAGCTCAGCT TCCTGGAAGG 
300
ACTGACAATG ATATCAAGAA TTATTGGAAC ACAAAACTGA AGAAGAAACT 
350
TCTAGGAAGA CAGAAACAAA TGAATCGTCA AGACTCCATA ACCGATTCTA 
400
CTGAGAACAA CCTCAGCAAC AATAACAACA ATAAGAGTCC TCAGAATCTG 
450
AGCAATTCGG CACTGGAGAG GCTCCAGCTT CACATGCAGC TTCAGAATCT 
500
ACAGAGCCCT TTCTCTAGTT TCTACAACAA CCCTATCTTG TGGCCCAAGC 
550
TTCATCCATT GCTCCAGAGC ACTACAACTA ATCAAAACCC TAAGCTTGCA 
600
TCTCAAGAAA GCTTCCACCC TTTAGGAGTT AACGTTGATC ATCAGCACAA 
650
CAATACCAAG CTAGCTCAGA TAAACAATGG AGCCTCTTCT CTCTATTCGG 
700
AGAACGTAGA GCAATCCCAA AACCCTGCTC ATGAATTTCA ACCTAATTTC 
750
GGTTTTTCAC AGGACCTTCG ATTAGATAAT CATAACATGG ACTTTATGAA 
800
CAGAGGGGTT TCTAAAGAAC TGTTTCAAGT GGGCAACGAG TTTGAGCTAA 
850
CGAACGGTTC GAGTTGGTGG TCAGAGGAAG TGGAACTAGA GAGGAAAACG 
900
ACGTCGTCGA GTTCTTGGGG GTCAGCTTCT GTGCTTGATC AGACAACTGA 
950
GGGAATGGTT ATGCTTCAAG ATTACGCTCA GATGAGCTAC CACAGTGTTT 
1000
AA
1050

>AT5G57620.1 longest ORF length:333
MGRAPCCDKA NVKKGPWSPE EDVKLKDYID KYGTGGNWIA LPQKIGLKRC 
50
GKSCRLRWLN YLRPNIKHGG FSEEEDRIIL SLYISIGSRW SIIAAQLPGR 
100
TDNDIKNYWN TKLKKKLLGR QKQMNRQDSI TDSTENNLSN NNNNKSPQNL 
150
SNSALERLQL HMQLQNLQSP FSSFYNNPIL WPKLHPLLQS TTTNQNPKLA 
200
SQESFHPLGV NVDHQHNNTK LAQINNGASS LYSENVEQSQ NPAHEFQPNF 
250
GFSQDLRLDN HNMDFMNRGV SKELFQVGNE FELTNGSSWW SEEVELERKT 
300
TSSSSWGSAS VLDQTTEGMV MLQDYAQMSY HSV
350