fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G57720 AP2/B3-like transcriptional factor family protein (.1)

>AT5G57720.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRI, HindIII, KpnI, NcoI, NheI, NotI, PacI, PstI, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 44
EcoRV GAT|ATC 354
HpaI GTT|AAC 514
NdeI CA|TATG 397, 837
PvuII CAG|CTG 128
StyI C|C[AT][AT]GG 320


Click here to view TAIR data

>AT5G57720.1 length:903
ATGGTGTTAG AAAATGGGTT TCCTCCATAT CCAGATTTCC TCAAGATCTT 
50
CAACTCCCAT GAAGATTCTC AACTTTTGGT AATCCCAAGA AGCTACAACA 
100
GGTATTATCC AAACCCTCTC CCTCAGACAG CTGTTCTCAA GAATCCGGAA 
150
GGAAGATTTT GGAATGTCCA ATGGACAAAA AGCCAAGAGG TGATTATTAG 
200
CTTGCAAGAA GGTTGGGTAA AGTTTGTCAA AGACAATGGT CTTATTGACA 
250
GAGACTTTCT CTTATTCACC TATGATGGTT CCCGGAGCTT TTGGGTACGC 
300
ATCCACCGGA ATGGCCTCCC CTTGGAGCCA ACCGCTCCTA TCAAAATACA 
350
AGAGATATCG GATGATGAAG ATGAGACCAA TGGTGATGGT GATCCTCATA 
400
TGGAAGAAGA AGGAGATACC GATGAGAACA TGATAGTTTC TCTTTCTCTC 
450
GGAAGCAGCG ATGAAGTTGG TGATGATGAT GATGATGATT ATGATACAGC 
500
GATTTGTGAT GAAGTTAACA AAGCTAGTGG AAGTTCCAAG AAAGGAAGGG 
550
TTACAAGAAA GCATCGTGAT GATTCTCTTG CTTCTATTAC TCCGCAAATT 
600
TTTCTTGCTG ATCCCAATAA CCCGTTCTTC ATTTCAACTT CATCGTGTTC 
650
CAGGCGTATA TTGGTAATTG CTAGGCAAGT AATAAAAGAC TATGGCTTAA 
700
ACTTTGACGG CACGGTCAAT CTAATCGATG GATTCGGGGA ATTAACGAGA 
750
AAGGTTGGGA AATGGAAAGA TCGTGTTGTG ATATACAAGT GGAACGAAAT 
800
GTTTACGAGG AACAAAGTAA AGCAAGGAGA CGTAATCATA TGTGAGATTA 
850
TACGCGAAGA AGATGTTGTT CGCTCCATCA AAGTGCACTT CGTGAAGAAT 
900
TGA
950

>AT5G57720.1 longest ORF length:300
MVLENGFPPY PDFLKIFNSH EDSQLLVIPR SYNRYYPNPL PQTAVLKNPE 
50
GRFWNVQWTK SQEVIISLQE GWVKFVKDNG LIDRDFLLFT YDGSRSFWVR 
100
IHRNGLPLEP TAPIKIQEIS DDEDETNGDG DPHMEEEGDT DENMIVSLSL 
150
GSSDEVGDDD DDDYDTAICD EVNKASGSSK KGRVTRKHRD DSLASITPQI 
200
FLADPNNPFF ISTSSCSRRI LVIARQVIKD YGLNFDGTVN LIDGFGELTR 
250
KVGKWKDRVV IYKWNEMFTR NKVKQGDVII CEIIREEDVV RSIKVHFVKN 
300