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| Locus | Common name | Short description |
| AT5G57960 | GTP-binding protein, HflX (.1) |
>AT5G57960.1 CDS map
>>Show genomic map
Uncut enzymes: AatII, Acc65I, AccI, AccII(FnuDII), AccIII(BspMII), AclI, AfeI, AflII, AgeI, AlwI, Aor51HI(Eco47III), ApaI, ApaLI, AscI, AvaI, AvrII, BaeI, BamHI, BanI, BbsI, BbvCI, BbvI, BcgI, BciVI, BclI, BglI, BglII, BlpI, BmrI, BpmI, BsaAI, BsaBI, BsaHI, BsaI, BsaWI, BsaXI, BseRI, BsgI, BsiEI, BsiWI, BsmAI, BsmBI, BsmFI, BsoBI, BspDI, BspEI, BspMI, BspT107I(HgiCI), BsrBI, BsrFI, BsrGI, BssHII, BssSI, BstEII, BstUI, BstYI, BstZ17I, Bsu36I, BtgI, BtrI, Cfr10I, ClaI, DraI, DraIII, DrdI, EagI, EarI, EciI, EcoRI, EcoRV, FauI, FokI, FseI, FspI, HaeII, HgaI, HhaI, HinP1I, HindIII, HpaI, HpaII, HphI, I-CeuI, I-SceI, KasI, KpnI, MboII, MluI, MlyI, MnlI, MslI, MspI, NaeI, , NarI, NciI, NcoI, NdeI, NgoMIV, NotI, NruI, NsiI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PciI, PflFI, PleI, PmeI, PmlI, PshAI, PsiI, PspOMI, PstI, PvuI, RsrII, SacII, SalI, SapI, SbfI, ScaI, SexAI, SfaNI, SfcI, SfiI, SfoI, SgrAI, SmaI, SnaBI, SpeI, SphI, SwaI, TliI, Tth111I, XbaI, XcmI, XhoI, XmaI
| Name | Recognition sequence | Cut positions |
| AciI | C|CGC | 643, 648, 681, 1547 |
| AflIII | A|CPuPyGT | 1542 |
| AhdI | GACNNN|NNGTC | 1588 |
| AluI | AG|CT | 2, 293, 312, 417, 474, 478, 1222, 1320, 1410, 1563 |
| AlwNI | CAGNNN|CTG | 1088 |
| ApoI | Pu|AATTPy | 1072 |
| AseI | AT|TAAT | 541 |
| AvaII | G|G[AT]CC | 1463 |
| BalI | TGG|CCA | 783 |
| BanII | GPuGCPy|C | 3 |
| BfaI | C|TAG | 353, 419, 476, 492, 713, 747, 1379 |
| BsaJI | C|CNNGG | 589, 938 |
| BsiHKAI | G[AT]GC[AT]|C | 3 |
| BslI | CCNNNNN|NNGG | 611, 622, 659, 791, 1202 |
| BsmI | GAATGCN| | 386 |
| Bsp1286I | G[GAT]GC[CAT]|C | 3, 1538 |
| BspHI | T|CATGA | 690, 1404 |
| BsrDI | GCAATGNN| | 1396 |
| BsrI | ACTGGN| | 988, 1203, 1339, 1369 |
| BssKI | |CCNGG | 588, 605 |
| BstAPI | GCANNNN|NTGC | 543 |
| BstBI | TT|CGAA | 337 |
| BstF5I | GGATGNN| | 628, 1303 |
| BstNI | CC|[AT]GG | 588, 605 |
| BstXI | CCANNNNN|NTGG | 987 |
| BtsI | GCAGTGNN| | 453 |
| Cac8I | GCN|NGC | 48, 447, 477, 905 |
| DdeI | C|TNAG | 315, 1470 |
| DpnI | GA-CH3|TC | 507, 1031, 1304 |
| DpnII | |GATC | 507, 1031, 1304 |
| EaeI | Py|GGCCPu | 783 |
| EcoNI | CCTNN|NNNAGG | 611 |
| EcoO109I | PuG|GNCCPy | 1464 |
| Fnu4HI | GC|NGC | 681, 696, 1128, 1565 |
| HaeIII | GG|CC | 613, 679, 782 |
| HincII | GTPy|PuAC | 1186 |
| HinfI | G|ANTC | 307, 405, 758, 829, 870, 1161, 1419 |
| Hpy188I | TCN|GA | 316, 887, 1052, 1135, 1242, 1364 |
| Hpy99I | CG[AT]CG| | 1250 |
| HpyCH4III | ACN|GT | 174, 561, 1089 |
| HpyCH4IV | A|CGT | 552, 1251, 1542, 1552 |
| HpyCH4V | TG|CA | 76, 448, 535, 702, 1021, 1056, 1176, 1391, 1558 |
| MboI | |GATC | 507, 1031, 1304 |
| MfeI | C|AATTG | 595, 982 |
| MscI | TGG|CCA | 783 |
| MseI | T|TAA | 393, 540, 743, 789, 1569 |
| MspA1I | C[AC]G|C[GT]G | 1564 |
| MwoI | GCNNNNN|NNGC | 438, 543, 833, 890, 1137 |
| N.BstNBI | GAGTCNNNN|N | 1166 |
| NheI | G|CTAGC | 477 |
| NlaIII | CATG| | 107, 152, 689, 1178, 1403 |
| NlaIV | GGN|NCC | 1463 |
| NspI | PuCATG|Py | 1179 |
| PflMI | CCANNNN|NTGG | 1202 |
| PpuMI | PuG|G[AT]CCPy | 1464 |
| PspGI | |CC[AT]GG | 588, 605 |
| PvuII | CAG|CTG | 1564 |
| RsaI | GT|AC | 727, 837, 923, 966 |
| SacI | GAGCT|C | 3 |
| Sau3AI | |GATC | 507, 1031, 1304 |
| Sau96I | G|GNCC | 679, 1463 |
| ScrFI | CC|NGG | 588, 605 |
| SmlI | C|TPyPuAG | 412, 766, 1414 |
| SspI | AAT|ATT | 397 |
| StuI | AGG|CCT | 614 |
| StyI | C|C[AT][AT]GG | 938 |
| Taqƒ¿I | T|CGA | 204, 231, 336, 631, 1248 |
| TfiI | G|A[AT]TC | 307, 405, 829, 870, 1419 |
| TseI | G|C[AT]GC | 696, 1128, 1565 |
| Tsp45I | |GT[CG]AC | 640 |
| Tsp509I | |AATT | 28, 538, 594, 811, 844, 981, 1071, 1261, 1269, 1348 |
| TspRI | NNCA[CG]TGNN| | 44, 453, 1203 |
| XmnI | GAANN|NNTTC | 194, 1076 |
Click here to view TAIR data
>AT5G57960.1 length:1623
ATGAGCTCGT TTTACCTTTC TTCTTCTCCA ATTTTCAAAC TTCAGTGGCA | 50 |
CGCAAACCAT AAACCTAAAC CCAATCGTGC AATAGTTTCT TTTCCACCTT | 100 |
CTCGTCTTCA TGCCAACTGC TATTCGTGGA GATTATCTTG TAACCTTGCT | 150 |
CAACATGGTA TTGAGTTGGA GGAAACTGTG GAGGAAGATG AAATCCTTCA | 200 |
AGTTCTCGAC TTACCAACAG AGGAGACAAA TCTCGACAAC GAAACGATTG | 250 |
CTTCTCCATC TAAAATGTTG AGGAAGAAAA AAGGAGATGA AGAGAGCTTG | 300 |
GACGATAGAT TCAAGCTCAG AAATGGAAAG GAGATTTTCG AAGAGAAGGC | 350 |
ATATCTAGTG GGCGTGGAAA GAAAGGGTGA TGGAGAATGC TTGTTTAATA | 400 |
TTGAGGAATC TCTTGAGGAG CTAGAACAAC TTGCGGATAC TGCTGGGCTT | 450 |
GCAGTGGTTG GTTCTACTTA TCAAAAGCTA GCTTCCCCAA ATCCTAGAAC | 500 |
ATACATTGGA TCAGGAAAGG TCGCAGAGAT AAAAAGTGCA ATTAATGCTT | 550 |
TGGACGTTGA GACTGTGATA TTTGACGATG AACTTTCACC AGGGCAATTG | 600 |
CGTAACCTGG AAAAGGCCTT TGGTGGGGAT GTTCGAGTTT GTGACCGCAC | 650 |
CGCCCTTATC TTGGACATTT TCAACCAAAG GGCCGCAACT CATGAAGCAG | 700 |
CCTTGCAGGT TGCTCTAGCA CAAATGGAGT ACCAGTTGCC ACGATTAACT | 750 |
AGAATGTGGA CTCATCTTGA GCGTCAATCT GGTGGCCAAG TTAAGGGTAT | 800 |
GGGAGAAAAA CAAATTGAAG TTGATAAGCG AATCTTGCGT ACTCAAATTG | 850 |
GAGTTCTCAA AAAGGAGTTG GAATCTGTAA GAAAGCATCG GAAGCAGTAT | 900 |
AGAAGCAGGC GTGTTGCTAT ACCTGTACCT GTTGTATCCT TGGTCGGTTA | 950 |
CACAAACGCT GGAAAGAGTA CACTATTGAA CCAATTGACT GGTGCTAATG | 1000 |
TTCTCGCTGA AAATCGTTTG TTTGCAACTC TTGATCCAAC TACGAGAAGG | 1050 |
GTTCAGATGC AAAACGGGAA GGAATTTCTT CTCACAGATA CTGTTGGTTT | 1100 |
TATCCAAAAG TTACCAACCA CTCTGGTTGC TGCTTTCAGA GCAACACTTG | 1150 |
AAGAAATAGC AGAGTCAAGC CTTTTGGTGC ATGTTGTTGA CATCAGCCAC | 1200 |
CCACTGGCAG AGCAACAAAT AGAAGCTGTG GAGAAGGTTA TGTCTGAACT | 1250 |
CGACGTTTCA TCAATTCCAA AATTGGTCGT GTGGAATAAG GTTGATAGAG | 1300 |
TGGATGATCC TCAAAAGGTC AAGCTGGAAG CAGAGGAAAC TGGGGATACA | 1350 |
ATTTGTATAT CTGCTCTGAC TGGAGAAGGA CTAGACGACT TCTGCAATGC | 1400 |
TGTTCATGAG AAGCTCAAGG ATTCAATGGT TTGGGTTGAA GCCCTTTTGC | 1450 |
CATTTGATAA AGGGGACCTT CTAAGCACCA TACACAAGGT TGGAATGGTG | 1500 |
AAAGAAACTG AATATACAGA GAATGGGACA CTTATCAGGG CACACGTTCC | 1550 |
GCTACGTTTT GCACAGCTGC TTAAACCTAT GAGACACTTG GTCAAAGATA | 1600 |
CTTCAATAAG CCAAAGAGGA TGA | 1650 |
>AT5G57960.1 longest ORF length:540
MSSFYLSSSP IFKLQWHANH KPKPNRAIVS FPPSRLHANC YSWRLSCNLA | 50 |
QHGIELEETV EEDEILQVLD LPTEETNLDN ETIASPSKML RKKKGDEESL | 100 |
DDRFKLRNGK EIFEEKAYLV GVERKGDGEC LFNIEESLEE LEQLADTAGL | 150 |
AVVGSTYQKL ASPNPRTYIG SGKVAEIKSA INALDVETVI FDDELSPGQL | 200 |
RNLEKAFGGD VRVCDRTALI LDIFNQRAAT HEAALQVALA QMEYQLPRLT | 250 |
RMWTHLERQS GGQVKGMGEK QIEVDKRILR TQIGVLKKEL ESVRKHRKQY | 300 |
RSRRVAIPVP VVSLVGYTNA GKSTLLNQLT GANVLAENRL FATLDPTTRR | 350 |
VQMQNGKEFL LTDTVGFIQK LPTTLVAAFR ATLEEIAESS LLVHVVDISH | 400 |
PLAEQQIEAV EKVMSELDVS SIPKLVVWNK VDRVDDPQKV KLEAEETGDT | 450 |
ICISALTGEG LDDFCNAVHE KLKDSMVWVE ALLPFDKGDL LSTIHKVGMV | 500 |
KETEYTENGT LIRAHVPLRF AQLLKPMRHL VKDTSISQRG | 550 |