Locus |
Common name |
Short description |
AT5G58010 |
LRL3, bHLH082 |
LJRHL1-like 3 (.1) |
>AT5G58010.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BglII, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PvuII, SacI, SmaI, SpeI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
BamHI
| G|GATCC |
102, 772 |
EcoRI
| G|AATTC |
31 |
EcoRV
| GAT|ATC |
744 |
PstI
| CTGCA|G |
833 |
SalI
| G|TCGAC |
160, 255 |
StyI
| C|C[AT][AT]GG |
884 |
Click here to view TAIR data
>AT5G58010.1 length:894
ATGGAAAATG GAAATGGAGA AGGAAAAGGA GAATTCATAA ACCAAAACAA | 50 |
TGACTTCTTC CTTGATTCCA TGTCAATGCT CTCCTCTCTC CCTCCTTGTT | 100 |
GGGATCCATC TCTTCCTCCT CCTCCTCCTC CGCCACAATC TCTTTTCCAC | 150 |
GCTCTAGCCG TCGACGCCCC CTTCCCCGAC CAGTTCCATC ATCCTCAGGA | 200 |
GTCAGGAGGT CCAACAATGG GTAGCCAAGA AGGGTTACAG CCACAAGGTA | 250 |
CAGTGTCGAC CACGAGCGCA CCTGTTGTTC GTCAAAAGCC AAGAGTTCGA | 300 |
GCCAGGAGAG GCCAAGCCAC CGATCCTCAC AGTATCGCTG AGAGGCTTAG | 350 |
AAGGGAACGC ATCGCAGAGC GTATGAAGTC TCTCCAAGAA CTGGTTCCCA | 400 |
ACACCAACAA GACGGATAAG GCATCAATGT TGGACGAGAT CATCGAGTAT | 450 |
GTTAGGTTCC TTCAGCTTCA AGTCAAAGTA CTAAGCATGA GCAGATTGGG | 500 |
AGGTGCAGGA TCAGTTGGTC CACGCCTCAA TGGTCTCTCC GCAGAGGCAG | 550 |
GAGGACGGCT CAATGCCCTC ACTGCACCGT GCAATGGCTT AAATGGGAAT | 600 |
GGAAACGCTA CAGGATCGTC CAATGAGAGC CTAAGGTCAA CAGAACAAAG | 650 |
AGTGGCGAAA CTGATGGAGG AAGACATGGG ATCAGCAATG CAATACCTTC | 700 |
AAGGGAAGGG GCTTTGCTTA ATGCCAATAT CTCTCGCAAC CGCGATATCA | 750 |
TCATCAACTA CTCACTCTCG TGGATCCCTC TTTAACCCCA TCTCCAGTGC | 800 |
TGTAGCAGCA GAGGATTCAA ATGTAACAGC AACTGCAGTT GCTGCACCTG | 850 |
AAGCCTCGTC TACTATGGAT GATGTATCTG CTTCCAAGGC CTGA | 900 |
>AT5G58010.1 longest ORF length:297
MENGNGEGKG EFINQNNDFF LDSMSMLSSL PPCWDPSLPP PPPPPQSLFH | 50 |
ALAVDAPFPD QFHHPQESGG PTMGSQEGLQ PQGTVSTTSA PVVRQKPRVR | 100 |
ARRGQATDPH SIAERLRRER IAERMKSLQE LVPNTNKTDK ASMLDEIIEY | 150 |
VRFLQLQVKV LSMSRLGGAG SVGPRLNGLS AEAGGRLNAL TAPCNGLNGN | 200 |
GNATGSSNES LRSTEQRVAK LMEEDMGSAM QYLQGKGLCL MPISLATAIS | 250 |
SSTTHSRGSL FNPISSAVAA EDSNVTATAV AAPEASSTMD DVSASKA | 300 |
|