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| Locus | Common name | Short description |
| AT5G58620 | zinc finger (CCCH-type) family protein (.1) |
>AT5G58620.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, SacI, SalI, SmaI, SpeI
| Name | Recognition sequence | Cut positions |
| EcoRI | G|AATTC | 769 |
| EcoRV | GAT|ATC | 595 |
| HindIII | A|AGCTT | 1503, 1597 |
| PvuII | CAG|CTG | 1387 |
| StyI | C|C[AT][AT]GG | 1614 |
| XbaI | T|CTAGA | 661 |
| XhoI | C|TCGAG | 888 |
Click here to view TAIR data
>AT5G58620.1 length:1824
ATGGGAGTTG ATGAGCTGTC TCACCTCAAA TTCTCTCTTC TGCTAGAATC | 50 |
ATCAGCCTGC AATGATTTGT CCGGTTTTAA GTCTCTAGTT GAAGAAGAAG | 100 |
GTCTTGAGAG CATTGATGGC TCTGGTTTGT GGTATGGGAG GAGATTAGGA | 150 |
TCAAAGAAGA TGGGTTTTGA GGAGAGGACG CCTCTTATGA TTGCTGCCTT | 200 |
GTTTGGAAGC AAAGAGGTTG TTGATTACAT CATTAGTACT GGTCTTGTTG | 250 |
ACGTGAACCG CTCTTGTGGC TCTGATGGTG CCACGGCTCT TCACTGTGCG | 300 |
GTCTCTGGCT TGTCTGCCAA TAGCCTTGAG ATTGTTACTC TTCTGCTGAA | 350 |
GGGCTCTGCG AATCCGGATT CTTGTGATGC TTATGGTAAC AAGCCTGGAG | 400 |
ATGTGATTTT CCCTTGTTTG AGTCCGGTTT TTAGCGCGAG GATGAAGGTT | 450 |
TTGGAGCGTT TGTTGAAAGG AAATGATGAT TTGAATGAAG TTAATGGGCA | 500 |
AGAAGAAAGC GAGCCAGAGG TTGAGGTTGA GGTTGAGGTT TCGCCTCCTC | 550 |
GGGGGTCTGA GAGGAAGGAG TATCCGGTTG ATCCAACGCT TCCTGATATC | 600 |
AAGAACGGTG TATATGGGAC GGATGAGTTC CGGATGTATG CTTTCAAGAT | 650 |
CAAGCCGTGC TCTAGAGCAT ACTCTCACGA CTGGACGGAA TGTCCCTTTG | 700 |
TTCATCCGGG TGAGAACGCA AGGAGGCGTG ATCCGAGGAA GTACCATTAT | 750 |
AGTTGTGTCC CTTGTCCTGA ATTCCGGAAG GGGTCTTGTT CCAGAGGTGA | 800 |
TACTTGCGAG TATGCTCATG GTATCTTTGA GTGCTGGCTT CACCCGGCTC | 850 |
AGTACCGGAC TCGTCTCTGC AAGGACGAGA CGAATTGCTC GAGAAGAGTT | 900 |
TGTTTCTTTG CCCACAAACC CGAGGAGCTG CGTCCTTTGT ACCCTTCAAC | 950 |
TGGATCAGGT GTTCCGTCCC CGCGGTCTTC CTTCTCATCT TGCAATTCCT | 1000 |
CGACCGCTTT CGACATGGGA CCGATTAGTC CGCTTCCTAT CGGAGCAACA | 1050 |
ACCACACCTC CTTTGAGTCC TAACGGTGTA TCCTCTCCAA TAGGTGGAGG | 1100 |
AAAAACGTGG ATGAACTGGC CTAACATAAC CCCTCCTGCA TTGCAGCTTC | 1150 |
CAGGGAGCAG ATTGAAATCT GCATTGAATG CAAGAGAAAT CGATTTCTCT | 1200 |
GAAGAGATGC AAAGTCTTAC TTCTCCAACT ACATGGAACA ACACGCCAAT | 1250 |
GTCATCTCCA TTCTCCGGAA AGGGCATGAA CAGGCTTGCA GGAGGAGCAA | 1300 |
TGAGCCCGGT GAATAGTCTC AGTGATATGT TTGGGACAGA GGATAATACA | 1350 |
TCGGGTTTGC AGATCCGACG CAGCGTCATT AACCCGCAGC TGCATTCCAA | 1400 |
CAGTCTTTCT TCATCACCTG TGGGAGCCAA TTCTCTGTTT TCGATGGATT | 1450 |
CCTCCGCAGT CTTGGCTTCA AGAGCGGCTG AATTTGCTAA ACAGCGAAGC | 1500 |
CAAAGCTTCA TAGAACGCAA CAACGGACTG AATCACCATC CCGCAATCTC | 1550 |
TTCCATGACT ACAACTTGTT TAAACGATTG GGGCTCATTG GATGGGAAGC | 1600 |
TTGACTGGAG CGTCCAAGGA GACGAGCTAC AGAAGCTCAG AAAATCCACT | 1650 |
TCTTTCCGTC TCAGAGCCGG TGGCATGGAA TCAAGACTGC CTAACGAAGG | 1700 |
GACTGGGCTC GAAGAGCCAG ATGTCTCATG GGTGGAGCCG CTGGTGAAAG | 1750 |
AGCCACAGGA GACAAGACTA GCTCCGGTTT GGATGGAGCA ATCATACATG | 1800 |
GAGACAGAAC AGACCGTGGC TTGA | 1850 |
>AT5G58620.1 longest ORF length:607
MGVDELSHLK FSLLLESSAC NDLSGFKSLV EEEGLESIDG SGLWYGRRLG | 50 |
SKKMGFEERT PLMIAALFGS KEVVDYIIST GLVDVNRSCG SDGATALHCA | 100 |
VSGLSANSLE IVTLLLKGSA NPDSCDAYGN KPGDVIFPCL SPVFSARMKV | 150 |
LERLLKGNDD LNEVNGQEES EPEVEVEVEV SPPRGSERKE YPVDPTLPDI | 200 |
KNGVYGTDEF RMYAFKIKPC SRAYSHDWTE CPFVHPGENA RRRDPRKYHY | 250 |
SCVPCPEFRK GSCSRGDTCE YAHGIFECWL HPAQYRTRLC KDETNCSRRV | 300 |
CFFAHKPEEL RPLYPSTGSG VPSPRSSFSS CNSSTAFDMG PISPLPIGAT | 350 |
TTPPLSPNGV SSPIGGGKTW MNWPNITPPA LQLPGSRLKS ALNAREIDFS | 400 |
EEMQSLTSPT TWNNTPMSSP FSGKGMNRLA GGAMSPVNSL SDMFGTEDNT | 450 |
SGLQIRRSVI NPQLHSNSLS SSPVGANSLF SMDSSAVLAS RAAEFAKQRS | 500 |
QSFIERNNGL NHHPAISSMT TTCLNDWGSL DGKLDWSVQG DELQKLRKST | 550 |
SFRLRAGGME SRLPNEGTGL EEPDVSWVEP LVKEPQETRL APVWMEQSYM | 600 |
ETEQTVA | 650 |