| Locus |
Common name |
Short description |
| AT5G59340 |
WOX2 |
WUSCHEL related homeobox 2 (.1) |
>AT5G59340.1 CDS map
>>Show genomic map

Uncut enzymes: AatII, Acc65I, AccII(FnuDII), AccIII(BspMII), AciI, AclI, AfeI, AflII, AflIII, AhdI, AluI, AlwI, AlwNI, Aor51HI(Eco47III), ApaI, ApaLI, ApoI, AscI, AseI, AvaI, AvaII, AvrII, BaeI, BalI, BamHI, BanI, BanII, BbsI, BbvCI, BbvI, BcgI, BciVI, BglI, BglII, BlpI, BmrI, BpmI, BsaAI, BsaBI, BsaHI, BsaI, BsaXI, BseRI, BsgI, BsiHKAI, BsmAI, BsmBI, BsmFI, BsoBI, Bsp1286I, BspDI, BspEI, BspHI, BspMI, BspT107I(HgiCI), BsrBI, BsrDI, BsrGI, BssHII, BssKI, BssSI, BstBI, BstEII, BstF5I, BstNI, BstUI, BstXI, BstYI, Bsu36I, BtgI, BtrI, BtsI, ClaI, DraI, DraIII, EarI, EciI, EcoNI, EcoO109I, EcoRI, EcoRV, FauI, FokI, FseI, FspI, HgaI, HincII, HindIII, HpaI, HphI, Hpy99I, I-CeuI, I-SceI, KasI, KpnI, MboII, MfeI, MluI, MlyI, MnlI, MscI, MspA1I, N.BstNBI, , NarI, NciI, NcoI, NheI, NotI, NruI, NsiI, NspI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PciI, PflFI, PleI, PmeI, PmlI, PpuMI, PshAI, PsiI, PspGI, PspOMI, PstI, PvuI, PvuII, RsrII, SacI, SacII, SalI, SapI, Sau96I, SbfI, ScaI, ScrFI, SexAI, SfaNI, SfcI, SfiI, SfoI, SgrAI, SmaI, SmlI, SnaBI, SpeI, SphI, SspI, StuI, SwaI, TliI, Tth111I, XbaI, XcmI, XhoI, XmaI, XmnI
| Name |
Recognition sequence |
Cut positions |
| AccI
| GT|[AC][TG]AC |
367 |
| AgeI
| A|CCGGT |
133 |
| BclI
| T|GATCA |
339 |
| BfaI
| C|TAG |
201, 687 |
| BsaJI
| C|CNNGG |
660 |
| BsaWI
| [AT]|CCGG[AT] |
133, 675 |
| BsiEI
| CGPuPy|CG |
702 |
| BsiWI
| C|GTACG |
149 |
| BslI
| CCNNNNN|NNGG |
414, 580 |
| BsmI
| GAATGCN| |
489, 619 |
| BsrFI
| Pu|CCGGPy |
133, 550, 700 |
| BsrI
| ACTGGN| |
72, 182 |
| BstAPI
| GCANNNN|NTGC |
627 |
| BstZ17I
| GTA|TAC |
367 |
| Cac8I
| GCN|NGC |
28, 330, 700 |
| Cfr10I
| [AG]|CCGG[TC] |
133, 550, 700 |
| DdeI
| C|TNAG |
510 |
| DpnI
| GA-CH3|TC |
56, 61, 113, 127, 338, 377 |
| DpnII
| |GATC |
56, 61, 113, 127, 338, 377 |
| DrdI
| GACNNNN|NNGTC |
565 |
| EaeI
| Py|GGCCPu |
153, 702 |
| EagI
| C|GGCCG |
702 |
| Fnu4HI
| GC|NGC |
477, 710 |
| HaeII
| PuGCGC|Py |
109 |
| HaeIII
| GG|CC |
152, 701 |
| HhaI
| GCG|C |
108, 229 |
| HinP1I
| G|CGC |
108, 229 |
| HinfI
| G|ANTC |
119, 350, 404, 669 |
| HpaII
| C|CGG |
132, 549, 674, 699 |
| Hpy188I
| TCN|GA |
59, 104, 116, 446, 459, 500, 511 |
| HpyCH4III
| ACN|GT |
432, 541 |
| HpyCH4IV
| A|CGT |
171, 297, 564 |
| HpyCH4V
| TG|CA |
619 |
| MboI
| |GATC |
56, 61, 113, 127, 338, 377 |
| MseI
| T|TAA |
561 |
| MslI
| CAPyNN|NNPuTG |
362, 487 |
| MspI
| C|CGG |
132, 549, 674, 699 |
| MwoI
| GCNNNNN|NNGC |
24, 627 |
| NaeI
| GCC|GGC |
700 |
| NdeI
| CA|TATG |
346 |
| NgoMIV
| G|CCGGC |
700 |
| NlaIII
| CATG| |
232, 356 |
| NlaIV
| GGN|NCC |
44, 185, 697 |
| PflMI
| CCANNNN|NTGG |
414 |
| RsaI
| GT|AC |
148, 316 |
| Sau3AI
| |GATC |
56, 61, 113, 127, 338, 377 |
| StyI
| C|C[AT][AT]GG |
660 |
| Taqƒ¿I
| T|CGA |
159, 756 |
| TfiI
| G|A[AT]TC |
119, 350, 404, 669 |
| TseI
| G|C[AT]GC |
477, 710 |
| Tsp45I
| |GT[CG]AC |
435 |
| Tsp509I
| |AATT |
493, 569 |
| TspRI
| NNCA[CG]TGNN| |
577 |
Click here to view TAIR data
>AT5G59340.1 length:783
ATGGAAAACG AAGTAAACGC AGGAACAGCA AGCAGTTCAA GATGGAACCC | 50 |
AACGAAAGAT CAGATCACGC TACTGGAAAA TCTTTACAAG GAAGGAATAC | 100 |
GAACTCCGAG CGCCGATCAG ATTCAGCAGA TCACCGGTAG GCTTCGTGCG | 150 |
TACGGCCATA TCGAAGGTAA AAACGTCTTT TACTGGTTCC AGAACCATAA | 200 |
GGCTAGGCAA CGCCAAAAGC AGAAACAGGA GCGCATGGCT TACTTCAATC | 250 |
GCCTCCTCCA CAAAACCTCC CGTTTCTTCT ACCCCCCTCC TTGCTCAAAC | 300 |
GTGGGTTGTG TCAGTCCGTA CTATTTACAG CAAGCAAGTG ATCATCATAT | 350 |
GAATCAACAT GGAAGTGTAT ACACAAACGA TCTTCTTCAC AGAAACAATG | 400 |
TGATGATTCC AAGTGGTGGC TACGAGAAAC GGACAGTCAC ACAACATCAG | 450 |
AAACAACTTT CAGACATAAG AACAACAGCA GCCACAAGAA TGCCAATTTC | 500 |
TCCGAGTTCA CTCAGATTTG ACAGATTTGC CCTCCGTGAT AACTGTTATG | 550 |
CCGGTGAGGA CATTAACGTC AATTCCAGTG GACGGAAAAC ACTCCCTCTT | 600 |
TTTCCTCTTC AGCCTTTGAA TGCAAGTAAT GCTGATGGTA TGGGAAGTTC | 650 |
CAGTTTTGCC CTTGGTAGTG ATTCTCCGGT GGATTGTTCT AGCGATGGAG | 700 |
CCGGCCGAGA GCAGCCGTTT ATTGATTTCT TTTCTGGTGG TTCTACTTCT | 750 |
ACTCGTTTCG ATAGTAATGG TAATGGGTTG TAA | 800 |
>AT5G59340.1 longest ORF length:260
MENEVNAGTA SSSRWNPTKD QITLLENLYK EGIRTPSADQ IQQITGRLRA | 50 |
YGHIEGKNVF YWFQNHKARQ RQKQKQERMA YFNRLLHKTS RFFYPPPCSN | 100 |
VGCVSPYYLQ QASDHHMNQH GSVYTNDLLH RNNVMIPSGG YEKRTVTQHQ | 150 |
KQLSDIRTTA ATRMPISPSS LRFDRFALRD NCYAGEDINV NSSGRKTLPL | 200 |
FPLQPLNASN ADGMGSSSFA LGSDSPVDCS SDGAGREQPF IDFFSGGSTS | 250 |
TRFDSNGNGL | 300 |
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