Locus |
Common name |
Short description |
AT5G59570 |
BOA |
BROTHER OF LUX ARRHYTHMO, Homeodomain-like superfamily protein (.1) |
>AT5G59570.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
NcoI
| C|CATGG |
798 |
PvuII
| CAG|CTG |
517 |
StyI
| C|C[AT][AT]GG |
798 |
Click here to view TAIR data
>AT5G59570.1 length:897
ATGGGGAAGG AAGTTATGGT GAGCGATTAC GGTGACGACG ACGGAGAAGA | 50 |
CGCCGGCGGC GGCGATGAAT ATAGGATTCC GGAATGGGAA ATTGGTTTAC | 100 |
CCAACGGAGA TGATTTGACT CCGTTATCTC AATATCTAGT CCCGTCGATT | 150 |
CTCGCGTTAG CTTTCAGCAT GATCCCAGAA CGAAGCCGTA CAATTCACGA | 200 |
CGTCAATCGC GCGTCGCAAA TCACGCTCTC TTCGTTGAGA AGCAGTACCA | 250 |
ATGCTTCGTC TGTGATGGAG GAGGTCGTGG ATCGAGTTGA ATCGAGTGTT | 300 |
CCAGGATCAG ATCCGAAGAA ACAGAAGAAA TCGGATGGTG GTGAAGCAGC | 350 |
GGCGGTGGAG GATTCCACGG CGGAGGAAGG AGACTCCGGG CCTGAAGACG | 400 |
CGTCTGGGAA GACATCGAAA CGACCGCGTT TAGTGTGGAC ACCGCAGCTA | 450 |
CACAAGAGAT TTGTGGACGT TGTGGCTCAT CTAGGGATTA AAAACGCAGT | 500 |
GCCGAAGACG ATTATGCAGC TGATGAACGT GGAAGGACTT ACTCGTGAGA | 550 |
ACGTTGCGTC TCATTTGCAG AAATATAGGC TTTACCTTAA ACGGATTCAA | 600 |
GGATTGACGA CGGAAGAAGA TCCTTATTCG TCGTCGGATC AGCTCTTCTC | 650 |
TTCAACGCCG GTTCCTCCAC AGAGCTTTCA AGACGGCGGA GGAAGTAACG | 700 |
GAAAGTTGGG GGTTCCGGTT CCGGTTCCGT CGATGGTGCC TATTCCAGGC | 750 |
TATGGGAATC AAATGGGTAT GCAAGGATAT TATCAACAGT ATAGTAACCA | 800 |
TGGCAATGAA TCAAACCAAT ATATGATGCA GCAGAATAAG TTTGGAACAA | 850 |
TGGTGACATA TCCTTCTGTT GGTGGTGGTG ACGTGAATGA CAAGTAA | 900 |
>AT5G59570.1 longest ORF length:298
MGKEVMVSDY GDDDGEDAGG GDEYRIPEWE IGLPNGDDLT PLSQYLVPSI | 50 |
LALAFSMIPE RSRTIHDVNR ASQITLSSLR SSTNASSVME EVVDRVESSV | 100 |
PGSDPKKQKK SDGGEAAAVE DSTAEEGDSG PEDASGKTSK RPRLVWTPQL | 150 |
HKRFVDVVAH LGIKNAVPKT IMQLMNVEGL TRENVASHLQ KYRLYLKRIQ | 200 |
GLTTEEDPYS SSDQLFSSTP VPPQSFQDGG GSNGKLGVPV PVPSMVPIPG | 250 |
YGNQMGMQGY YQQYSNHGNE SNQYMMQQNK FGTMVTYPSV GGGDVNDK | 300 |
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