fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G59570 BOA BROTHER OF LUX ARRHYTHMO, Homeodomain-like superfamily protein (.1)

>AT5G59570.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
NcoI C|CATGG 798
PvuII CAG|CTG 517
StyI C|C[AT][AT]GG 798


Click here to view TAIR data

>AT5G59570.1 length:897
ATGGGGAAGG AAGTTATGGT GAGCGATTAC GGTGACGACG ACGGAGAAGA 
50
CGCCGGCGGC GGCGATGAAT ATAGGATTCC GGAATGGGAA ATTGGTTTAC 
100
CCAACGGAGA TGATTTGACT CCGTTATCTC AATATCTAGT CCCGTCGATT 
150
CTCGCGTTAG CTTTCAGCAT GATCCCAGAA CGAAGCCGTA CAATTCACGA 
200
CGTCAATCGC GCGTCGCAAA TCACGCTCTC TTCGTTGAGA AGCAGTACCA 
250
ATGCTTCGTC TGTGATGGAG GAGGTCGTGG ATCGAGTTGA ATCGAGTGTT 
300
CCAGGATCAG ATCCGAAGAA ACAGAAGAAA TCGGATGGTG GTGAAGCAGC 
350
GGCGGTGGAG GATTCCACGG CGGAGGAAGG AGACTCCGGG CCTGAAGACG 
400
CGTCTGGGAA GACATCGAAA CGACCGCGTT TAGTGTGGAC ACCGCAGCTA 
450
CACAAGAGAT TTGTGGACGT TGTGGCTCAT CTAGGGATTA AAAACGCAGT 
500
GCCGAAGACG ATTATGCAGC TGATGAACGT GGAAGGACTT ACTCGTGAGA 
550
ACGTTGCGTC TCATTTGCAG AAATATAGGC TTTACCTTAA ACGGATTCAA 
600
GGATTGACGA CGGAAGAAGA TCCTTATTCG TCGTCGGATC AGCTCTTCTC 
650
TTCAACGCCG GTTCCTCCAC AGAGCTTTCA AGACGGCGGA GGAAGTAACG 
700
GAAAGTTGGG GGTTCCGGTT CCGGTTCCGT CGATGGTGCC TATTCCAGGC 
750
TATGGGAATC AAATGGGTAT GCAAGGATAT TATCAACAGT ATAGTAACCA 
800
TGGCAATGAA TCAAACCAAT ATATGATGCA GCAGAATAAG TTTGGAACAA 
850
TGGTGACATA TCCTTCTGTT GGTGGTGGTG ACGTGAATGA CAAGTAA
900

>AT5G59570.1 longest ORF length:298
MGKEVMVSDY GDDDGEDAGG GDEYRIPEWE IGLPNGDDLT PLSQYLVPSI 
50
LALAFSMIPE RSRTIHDVNR ASQITLSSLR SSTNASSVME EVVDRVESSV 
100
PGSDPKKQKK SDGGEAAAVE DSTAEEGDSG PEDASGKTSK RPRLVWTPQL 
150
HKRFVDVVAH LGIKNAVPKT IMQLMNVEGL TRENVASHLQ KYRLYLKRIQ 
200
GLTTEEDPYS SSDQLFSSTP VPPQSFQDGG GSNGKLGVPV PVPSMVPIPG 
250
YGNQMGMQGY YQQYSNHGNE SNQYMMQQNK FGTMVTYPSV GGGDVNDK
300