fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G59780 ATMYB59, ATMYB59-1, ATMYB59-3, ATMYB59-2 myb domain protein 59 (.1.2.3)

>AT5G59780.2 CDS map

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Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, XbaI, XhoI
Name Recognition sequence Cut positions
NcoI C|CATGG 410
NdeI CA|TATG 256, 420
SpeI A|CTAGT 346
StyI C|C[AT][AT]GG 410, 542


Click here to view TAIR data

>AT5G59780.2 length:645
ATGGGATTTT GTAGCGAAAG TTTCAGGTTT GAAGGTGGAG GGAGAAACAT 
50
AAGAATAGGT TTAAACAGAA CAGGAAAGAG TTGCAGGTTA AGGTGGGTTA 
100
ATTACCTGCA TCCTGGTCTC AAACGTGGTA AGATGACTCC ACAAGAAGAG 
150
CGTTTAGTCC TTGAGCTTCA CGCCAAATGG GGAAACAGGT GGTCAAAAAT 
200
TGCCCGGAAA TTACCGGGGA GAACAGATAA TGAGATAAAG AACTACTGGA 
250
GGACTCATAT GAGGAAGAAG GCTCAAGAGA AGAAGCGACC TATGTCTCCT 
300
ACTTCCTCAT CTTCAAACTG TTGCTCATCA TCTATGACCA CTACTACTAG 
350
TCAAGACACT GGAGGCTCCA ACGGGAAAAT GAATCAAGAA TGCGAAGACG 
400
GGTACTACTC CATGGATGAC ATATGGAGAG AGATTGATCA GTCTGGAGCA 
450
AACGTTATTA AACCGGTAAA AGACAACTAC TACTCAGAGC AAAGCTGTTA 
500
CTTGAATTTC CCTCCTCTGG CTTCTCCAAC ATGGGAAAGT TCCTTGGAAT 
550
CTATATGGAA CATGGATGCA GATGAAAGTA AGATGTCTTC TTTTGCTATT 
600
GATCAGTTTC CTCTAAGTTT TGAACATGGT AGTGGTCGCC TTTAG
650

>AT5G59780.2 longest ORF length:214
MGFCSESFRF EGGGRNIRIG LNRTGKSCRL RWVNYLHPGL KRGKMTPQEE 
50
RLVLELHAKW GNRWSKIARK LPGRTDNEIK NYWRTHMRKK AQEKKRPMSP 
100
TSSSSNCCSS SMTTTTSQDT GGSNGKMNQE CEDGYYSMDD IWREIDQSGA 
150
NVIKPVKDNY YSEQSCYLNF PPLASPTWES SLESIWNMDA DESKMSSFAI 
200
DQFPLSFEHG SGRL
250