fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G59780 ATMYB59, ATMYB59-1, ATMYB59-3, ATMYB59-2 myb domain protein 59 (.1.2.3)

>AT5G59780.3 CDS map

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Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, XbaI, XhoI
Name Recognition sequence Cut positions
NcoI C|CATGG 473
NdeI CA|TATG 319, 483
SpeI A|CTAGT 409
StyI C|C[AT][AT]GG 473, 605


Click here to view TAIR data

>AT5G59780.3 length:708
ATGAAACTTG TGCAAGAAGA ATACCGTAAA GGACCGTGGA CAGAACAGGA 
50
GGACATCCTC TTGGTCAACT TTGTCCACTT GTTCGGAGAT CGAAGATGGG 
100
ATTTTGTAGC GAAAGTTTCA GGTTTAAACA GAACAGGAAA GAGTTGCAGG 
150
TTAAGGTGGG TTAATTACCT GCATCCTGGT CTCAAACGTG GTAAGATGAC 
200
TCCACAAGAA GAGCGTTTAG TCCTTGAGCT TCACGCCAAA TGGGGAAACA 
250
GGTGGTCAAA AATTGCCCGG AAATTACCGG GGAGAACAGA TAATGAGATA 
300
AAGAACTACT GGAGGACTCA TATGAGGAAG AAGGCTCAAG AGAAGAAGCG 
350
ACCTATGTCT CCTACTTCCT CATCTTCAAA CTGTTGCTCA TCATCTATGA 
400
CCACTACTAC TAGTCAAGAC ACTGGAGGCT CCAACGGGAA AATGAATCAA 
450
GAATGCGAAG ACGGGTACTA CTCCATGGAT GACATATGGA GAGAGATTGA 
500
TCAGTCTGGA GCAAACGTTA TTAAACCGGT AAAAGACAAC TACTACTCAG 
550
AGCAAAGCTG TTACTTGAAT TTCCCTCCTC TGGCTTCTCC AACATGGGAA 
600
AGTTCCTTGG AATCTATATG GAACATGGAT GCAGATGAAA GTAAGATGTC 
650
TTCTTTTGCT ATTGATCAGT TTCCTCTAAG TTTTGAACAT GGTAGTGGTC 
700
GCCTTTAG
750

>AT5G59780.3 longest ORF length:235
MKLVQEEYRK GPWTEQEDIL LVNFVHLFGD RRWDFVAKVS GLNRTGKSCR 
50
LRWVNYLHPG LKRGKMTPQE ERLVLELHAK WGNRWSKIAR KLPGRTDNEI 
100
KNYWRTHMRK KAQEKKRPMS PTSSSSNCCS SSMTTTTSQD TGGSNGKMNQ 
150
ECEDGYYSMD DIWREIDQSG ANVIKPVKDN YYSEQSCYLN FPPLASPTWE 
200
SSLESIWNMD ADESKMSSFA IDQFPLSFEH GSGRL
250