fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G60130 AP2/B3-like transcriptional factor family protein (.1.2)

>AT5G60130.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 174
XbaI T|CTAGA 529


Click here to view TAIR data

>AT5G60130.1 length:903
ATGGTACTAC CCATTTCTTT CACCAGATTT TTACCAAAGT CTTTGCCTGA 
50
AACTGTAACT GTTAGAAGCA TTTCTGGAAA TATTTGGAAA TTGGAGTTAA 
100
AGAAATGTTG TGGTGATGAT GATACTGAGA AATTCGTTAT GGTTAATGGG 
150
TGGAAGAGGA TTGTGAAGGA CGAAGATCTC AAGGGAGGAG ATTTCTTAGA 
200
GTTTGAGTTT GATGGCTCTA GTTGTTTCCA TTTCTGTATC TATGAGCATA 
250
GGACAATGTG TAAAAAGATA AGAAGAAGTT CAGATCAAAG CGAGGAGATC 
300
AAAGTGGAAT CTGATAGTGA TGAACAAAAT CAGGCCAGTG ATGATGTTTT 
350
ATCTCTTGAT GAGGATGATG ACGATTCTGA TTATAATTGT GGTGAAGACA 
400
ATGATAGTGA TGATTATGCT GATGAAGCTG CTGTCGAGAA AGATGATAAT 
450
GATGCTGATG ATGAAGATGT TGATAATGTT GCTGATGATG TTCCTGTTGA 
500
AGATGATGAT TATGTTGAGG CTTTTGATTC TAGAGATCAT GCTAAGGCTG 
550
ATGATGATGA TGAAGATGAA AGACAGTATC TGGATGATCG TGAGAACCCA 
600
TCTTTTACTC TGATCCTTAA TCCGAAGAAG AAAAGCCAAC TGCTCATCCC 
650
AGCTCGGGTT ATCAAAGACT ATGACTTGCA CTTCCCTGAG AGTATCACTC 
700
TTGTCGATCC ACTTGTGAAA AAATTCGGGA CATTGGAGAA GCAGATCAAG 
750
ATTCAGACAA ATGGTAGTGT GTTTGTCAAG GGATTTGGCA GTATCATCAG 
800
AAGGAATAAA GTGAAGACAA CGGATAAGAT GATATTTGAG ATCAAGAAGA 
850
CTGGTGATAA TAACCTGGTT CAAACAATCA AGATTCACAT TATCAGTGGA 
900
TGA
950

>AT5G60130.1 longest ORF length:300
MVLPISFTRF LPKSLPETVT VRSISGNIWK LELKKCCGDD DTEKFVMVNG 
50
WKRIVKDEDL KGGDFLEFEF DGSSCFHFCI YEHRTMCKKI RRSSDQSEEI 
100
KVESDSDEQN QASDDVLSLD EDDDDSDYNC GEDNDSDDYA DEAAVEKDDN 
150
DADDEDVDNV ADDVPVEDDD YVEAFDSRDH AKADDDDEDE RQYLDDRENP 
200
SFTLILNPKK KSQLLIPARV IKDYDLHFPE SITLVDPLVK KFGTLEKQIK 
250
IQTNGSVFVK GFGSIIRRNK VKTTDKMIFE IKKTGDNNLV QTIKIHIISG 
300