fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G60142 AP2/B3-like transcriptional factor family protein (.1)

>AT5G60142.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XbaI
Name Recognition sequence Cut positions
EcoRV GAT|ATC 586
XhoI C|TCGAG 727


Click here to view TAIR data

>AT5G60142.1 length:900
ATGATGAACA GAGGAATTTC TGTGGATGAT TGTCTTCCAA AGTTCTTCAA 
50
AGTGTACTTA CCTGATGATT CCGGAGATGA TTTGGAATTA CCCATCTCTT 
100
TCAACAGCTT TTTACCAAAG TCGTTGCCTA AAAATGTAAT TGTTAGAAGC 
150
ATTTATGGAA ACATCTGGAA AGTGGCGTTT AGGAAGTTTT GTGGTGATAG 
200
TGAGAGATTT GTTATGGTTA ATGGGTGGAA GAAGATAGTC AAGGACGAAG 
250
ATTTGAAAGG TGGAGAGTTC TTAGAATTTG AGTTTGATGG CTCTTGGTGT 
300
TTCAATTTCT GTATCTATGG TCGTGCAACG TGTAAAAGGC TTAGAAGTTC 
350
AGTGCAAATC ACGGTTCTTG ATGACAATGA TGATGGTTTT AATGATGATC 
400
AAGATTATGG GGAAGAAGTT AAATCTAGTG AAAATTTCAT AGTTCTTGAT 
450
GATGATGATA TTAGTGATGT TCAAGATTAT AATGAGGAAG ATACATCTAG 
500
TGAAGATATT ACAGCTCTTG ATGATGCTGA TAATGATGAT ATTAATGATG 
550
TTCAAGATTA TGTTGAGGAA GATACATCTA GTGAAGATAT CATAGTTATT 
600
GATGATGATG ATGATGATGA TGATCAAGAT TATGGTGACG ATGATCATGC 
650
TGATCTGCGC ATACCAACTA AGGTCATAAC GAAGTATGGC TTACACTTCC 
700
CTGAGTTCAT CAATTTGATT GATCCACTCG AGAAAAACTT TGGTAAATTG 
750
AAGAGGAAAG TTAAGGGTCA AACAATCAAG GGATTCCGTA GTATAATCAG 
800
AAGGAATAAT GTGAAGTTGA ATGACAAGGT GATTTGTGAG TTAGAAAAGG 
850
AGATGGATGG TCTTGTTCGA GAAATCAAGG TCCATGTTAT AAGAGGATGA 
900

>AT5G60142.1 longest ORF length:299
MMNRGISVDD CLPKFFKVYL PDDSGDDLEL PISFNSFLPK SLPKNVIVRS 
50
IYGNIWKVAF RKFCGDSERF VMVNGWKKIV KDEDLKGGEF LEFEFDGSWC 
100
FNFCIYGRAT CKRLRSSVQI TVLDDNDDGF NDDQDYGEEV KSSENFIVLD 
150
DDDISDVQDY NEEDTSSEDI TALDDADNDD INDVQDYVEE DTSSEDIIVI 
200
DDDDDDDDQD YGDDDHADLR IPTKVITKYG LHFPEFINLI DPLEKNFGKL 
250
KRKVKGQTIK GFRSIIRRNN VKLNDKVICE LEKEMDGLVR EIKVHVIRG
300