Locus |
Common name |
Short description |
AT5G60200 |
TMO6, AtDof5,3 |
TARGET OF MONOPTEROS 6 (.1) |
>AT5G60200.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NdeI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
NcoI
| C|CATGG |
643 |
NheI
| G|CTAGC |
156 |
StyI
| C|C[AT][AT]GG |
643 |
Click here to view TAIR data
>AT5G60200.1 length:774
ATGGATCATT TGTTACAACA CCAGGATGTT TTTGGGAATT ATAACAAAGC | 50 |
AAGAGAAGCA ATGGGACTAT CATATTCATC AAACCCAACA CCGTTAGATA | 100 |
ACGACCAGAA GAAACCTTCT CCTGCAACGG CTGTGACAAG GCCACAGCCT | 150 |
CCGGAGCTAG CTCTCAGGTG TCCACGTTGC GACTCAACAA ACACAAAGTT | 200 |
TTGTTACTAC AACAACTACA GTCTCACTCA GCCTCGCTAC TTCTGCAAAT | 250 |
CATGCCGGAG ATATTGGACT AAAGGTGGAA CTCTAAGGAA CATCCCCGTG | 300 |
GGTGGAGGCT GCCGGAAAAA CAAACGATCC ACATCTTCGG CTGCAAGAAG | 350 |
CCTCAGAACC ACTCCAGAAC CGGCGTCCCA CGACGGGAAA GTCTTCTCGG | 400 |
CGGCAGGTTT TAATGGGTAT AGTAACAATG AACATATTGA TCTGAGCTTA | 450 |
GCCTTTGCCT TGCTGAACAA ACAACATCCG GGGAGTTCTT CACAGCTAGG | 500 |
GTTTCATTCA GAACTCGGTA GCTCTCATCA GTCTGACATG GAAGGTATGT | 550 |
TTGGGACAAG CCAACAAAAA GAGAACGCTA CTTATGCGTT TGGTAACGGG | 600 |
AGCAGCGGTT TGGGTGATCC AAGCAGAGTC TTATGGGGAT TTCCATGGCA | 650 |
GATGAATGGA GAGAGCTTTG GAATGATGAA CATAGGAGGA GGTGGTGGTC | 700 |
ATGTAGATCA GATTGATTCA GGGAGAGAGA TGTGGACCAA TATGAACTAC | 750 |
ATTAATTCTG GTGCTTTAAT GTAG | 800 |
>AT5G60200.1 longest ORF length:257
MDHLLQHQDV FGNYNKAREA MGLSYSSNPT PLDNDQKKPS PATAVTRPQP | 50 |
PELALRCPRC DSTNTKFCYY NNYSLTQPRY FCKSCRRYWT KGGTLRNIPV | 100 |
GGGCRKNKRS TSSAARSLRT TPEPASHDGK VFSAAGFNGY SNNEHIDLSL | 150 |
AFALLNKQHP GSSSQLGFHS ELGSSHQSDM EGMFGTSQQK ENATYAFGNG | 200 |
SSGLGDPSRV LWGFPWQMNG ESFGMMNIGG GGGHVDQIDS GREMWTNMNY | 250 |
INSGALM | 300 |
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