fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G60200 TMO6, AtDof5,3 TARGET OF MONOPTEROS 6 (.1)

>AT5G60200.1 CDS map

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Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NdeI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
NcoI C|CATGG 643
NheI G|CTAGC 156
StyI C|C[AT][AT]GG 643


Click here to view TAIR data

>AT5G60200.1 length:774
ATGGATCATT TGTTACAACA CCAGGATGTT TTTGGGAATT ATAACAAAGC 
50
AAGAGAAGCA ATGGGACTAT CATATTCATC AAACCCAACA CCGTTAGATA 
100
ACGACCAGAA GAAACCTTCT CCTGCAACGG CTGTGACAAG GCCACAGCCT 
150
CCGGAGCTAG CTCTCAGGTG TCCACGTTGC GACTCAACAA ACACAAAGTT 
200
TTGTTACTAC AACAACTACA GTCTCACTCA GCCTCGCTAC TTCTGCAAAT 
250
CATGCCGGAG ATATTGGACT AAAGGTGGAA CTCTAAGGAA CATCCCCGTG 
300
GGTGGAGGCT GCCGGAAAAA CAAACGATCC ACATCTTCGG CTGCAAGAAG 
350
CCTCAGAACC ACTCCAGAAC CGGCGTCCCA CGACGGGAAA GTCTTCTCGG 
400
CGGCAGGTTT TAATGGGTAT AGTAACAATG AACATATTGA TCTGAGCTTA 
450
GCCTTTGCCT TGCTGAACAA ACAACATCCG GGGAGTTCTT CACAGCTAGG 
500
GTTTCATTCA GAACTCGGTA GCTCTCATCA GTCTGACATG GAAGGTATGT 
550
TTGGGACAAG CCAACAAAAA GAGAACGCTA CTTATGCGTT TGGTAACGGG 
600
AGCAGCGGTT TGGGTGATCC AAGCAGAGTC TTATGGGGAT TTCCATGGCA 
650
GATGAATGGA GAGAGCTTTG GAATGATGAA CATAGGAGGA GGTGGTGGTC 
700
ATGTAGATCA GATTGATTCA GGGAGAGAGA TGTGGACCAA TATGAACTAC 
750
ATTAATTCTG GTGCTTTAAT GTAG
800

>AT5G60200.1 longest ORF length:257
MDHLLQHQDV FGNYNKAREA MGLSYSSNPT PLDNDQKKPS PATAVTRPQP 
50
PELALRCPRC DSTNTKFCYY NNYSLTQPRY FCKSCRRYWT KGGTLRNIPV 
100
GGGCRKNKRS TSSAARSLRT TPEPASHDGK VFSAAGFNGY SNNEHIDLSL 
150
AFALLNKQHP GSSSQLGFHS ELGSSHQSDM EGMFGTSQQK ENATYAFGNG 
200
SSGLGDPSRV LWGFPWQMNG ESFGMMNIGG GGGHVDQIDS GREMWTNMNY 
250
INSGALM
300