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| Locus | Common name | Short description |
| AT5G61190 | putative endonuclease or glycosyl hydrolase with C2H2-type zinc finger domain (.1) |
>AT5G61190.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, EcoRV, HpaI, NheI, NotI, PacI, SmaI, XhoI
| Name | Recognition sequence | Cut positions |
| BglII | A|GATCT | 1867 |
| EcoRI | G|AATTC | 1099 |
| HindIII | A|AGCTT | 1234, 1354, 1474, 1627, 2176 |
| KpnI | GGTAC|C | 69 |
| NcoI | C|CATGG | 1331, 2270 |
| NdeI | CA|TATG | 2102 |
| PstI | CTGCA|G | 732 |
| PvuII | CAG|CTG | 1016, 2067 |
| SacI | GAGCT|C | 833, 1082 |
| SalI | G|TCGAC | 3 |
| SpeI | A|CTAGT | 1338 |
| StyI | C|C[AT][AT]GG | 1331, 2270 |
| XbaI | T|CTAGA | 1038, 2689 |
Click here to view TAIR data
>AT5G61190.1 length:2934
ATGTCGACGG CGGAGGCGGA TTACGTGAAG GCCAAAACAT CGGTGTGGTG | 50 |
GGATATAGAG AATTGCGAGG TACCCAGAGG TTGGGATGCG CACGTGATTG | 100 |
CCTTGAATGT GAGTTCGTCT TTGTTGAAGA TGAATTATTG TGGACCTGTC | 150 |
TCAATTTCAG CTTATGGCGA TACCAATCTC ATCCCTCTCC ATCATCAACA | 200 |
AGCACTTTCT TCTACTGGTG TTGCGCTTAA TCACATCCCA GCAGGAGTGA | 250 |
AAGATGCGAG CGATAAGAAG ATTCTGGTGG ATATGTTGTT GTGGGCAATA | 300 |
GACAACCCTG CGCCAGCGAA TTTATTGCTA ATCTCTGGTG ACAGAGACTT | 350 |
CTCTAACGCT CTCCATCAGC TAAGAATGAG GAGGTATAAC ATTCTTTTGG | 400 |
CTCAACCTCC ACGAGCCTCT GTGCCGCTTG TTGCTGCTGC CAGAGATGTT | 450 |
TGGCTCTGGA CAGTCCTAGC CTCGGGAGGT CCTCCTCTTA CAAGTGTTGA | 500 |
ATCCTCTCTA CTCTTTAACA ATGGGGGTTT TCGTGTCTCT AATAAAGGTG | 550 |
TGTCGAAACT TCCAGTTTCT GAACAAGCTC AGCCTAGCCA ACCAACTGGT | 600 |
TCAACTTCTA ACGCTGGAGA TACTAAGGAT CATAAAACCA GAGAAAAGCA | 650 |
TGTTCCAAGA GGATCACTTC AAGAAAATAG AAAAAATATG CTTCAGCATA | 700 |
GCAGTGGAGC CACAGGGGAA TCTGCTACTA CCTGCAGAAT ATGCAATGTT | 750 |
GTATGTGATA GCTTTGAAAA GTTCACCGCT CACCTTTCAG ATATAAGGCA | 800 |
TATATCTCAG GCTGCCATTG TAGAAAGTCG CAGAGCTCAG GCCAGCGTTT | 850 |
CAGCCAAACC CATACATCAA GCAGTTCTTG TCGAACCTTT GTTGTGCAAA | 900 |
GTTTGCCAGA TCAGCTTTAC CAACAATGAT ACATATAAAA ATCACACCTA | 950 |
TGGAAAAAAA CACCGAAACA ATTTGGAACT GCAATCAGGT AAGTCCAAAA | 1000 |
ACATTTTGGT GGGACCAGCT GAGCCTTCCA AAGAGGTTCT AGAGAAACAT | 1050 |
AATATGAATA AGAAGGTGAT GATTGAGAGT AGAGCTCAGG CAAACGCTGA | 1100 |
ATTCGTTTGT CTTATGTGCA ATGTGGTGTG CCAGAGTCAG ATTGTCTTTA | 1150 |
ATTCTCATCT GCGCGGTAAG AAGCATGCCA ACATGCTGAG TCAATCAGAG | 1200 |
GCAACATTGG ATCAGGCACT CATTGTTTCT ACAAAGCTTC AAGAGAAAGG | 1250 |
AGTCGGAGAA AAAGAACAAC CAAGTGAAAC AGTTGCAGAG CTTCAGTTGC | 1300 |
AGTCTCAAAA GGCTCAAGAG AAGCAGGTTC CCATGGTACT AGTTGATTCT | 1350 |
AAGAAGCTTC CAGAGAAAGG TGATGAAGTA AAGGGTCAAC CAAAAGAAAT | 1400 |
GACTGCACTG CGTAATGCAA GTGCTAAATA CATTTGTCGT ATGTGCAATG | 1450 |
ATCAGGCACT CATTGATTCT AAGAAGCTTC AAGAGAAAGG TTTCGGAGAA | 1500 |
AAAGAACAAC CAAGAGAAAC AATTGTAGAG CCACAGTTGC AGTCTCAAAA | 1550 |
CGCTCAAGAG AATAGCAAGT GTTTCGAAAA GCATGTTGTC ATGGTGAATC | 1600 |
AATCAGAGGT ACTCATCAAT GCGAGTAAGC TTGAAGAGAA AGATGCCCAA | 1650 |
GAAAAAGCTC AACCAATAGA ATCAATAGCC GAACCTCAGT CGCAGTCTCA | 1700 |
AAACACTCAA GAGCATACCA AATTCTTTGA GAAGCAAAAC GAAGAGTTGA | 1750 |
GAAAGATTTG TGGCACTTTA GAAAGCAGTG TAAAAGAACC TCTTCCAAGT | 1800 |
ACTAAGGACT GGGTGGAGAC TCTTAACAAA CAGATTCCAA ATGGAGAATT | 1850 |
TTTCTTTGGT GACCTAAGAT CTGATTTTGA AGTACCCAGG GAAGCAAGTG | 1900 |
AATGTTTTGA TGGCATTGTC AAGCCTGTAA ACCTTTCCAA AGGAGAAACT | 1950 |
AAGCATTCAT GGGAGGCCGC CTTTGTAGCC AGCAATGGTT CTCAGTCCAG | 2000 |
CGTTTCAACC AATCCTTTGA AGGAACCAGA GGGTTTGCAG CCCGTGTGGT | 2050 |
GCCAAGTCTG CCAGATCAGC TGCAACAGCA AGGTTGCATT TGCAAGTCAC | 2100 |
ACATATGGGA AAAAACACCG ACAGAACTTG GAATCACAAT CAGCCAAGAA | 2150 |
CGAAACTATG TCTACTGGAC CAGGCAAGCT TTCTAAAGAT TATGGAGAAA | 2200 |
AAACGAAGAA AGTATCATGC AAAAACCAAA CCACATTTGA TTCTCAACTG | 2250 |
AAGAGTCAGA ACCATTATAC CATGGCGAAG GAGCTTGTAG AGAAGGCATT | 2300 |
TGTCTCCGCA TTTGAGCATG TCTCCGCATT GGAGCAGTTC AGTATTGTTG | 2350 |
ACTCAAGGAC AATCCGAGAA GACACCGACC AAGAAAAAGA AGCAACAAAG | 2400 |
GAGCAGACAC TTGTAAAGAT GGATGGTAAT GGGTTTCGAG GGGCACCAGA | 2450 |
AGATAAAGTG GAATTGAACC AAGAAAAACA TAGAGAAGCA CTGGAGCAGT | 2500 |
TCAGTATTGA CTCAAGGATA ATCCGAGAAG AAACCGATCA AGAAAAAGAA | 2550 |
GCAACAGAGG AGCAGACACT TGTAAAGATG GATGATCTTG GGTTTCGAGG | 2600 |
GGCACCAGAA GATAAAGTGG AACTGAAGGA GAGACACACC GTATCTGAGA | 2650 |
ACTTGGTGCA CCGTGTCTTC ACTGAACAGA ATCGAGAGTC TAGAATACCC | 2700 |
AATGAACCGA GAGGATGTTT AGATGTGATT CCTGAGAGAG TAAAACTGCC | 2750 |
ACCAAACGTG AATGTGGCCA AGAATTTGGA AGATGAGCAG AAGCATAAAC | 2800 |
CCGAACCAAA AGCACAGGAA GCCGAAAACA AGTCTGGAGG ACGCAAGGAT | 2850 |
CTTCCTGGAG AGGCTGCCAA AAGGGAAGAG ATTAAGGGCC AAGCTGATAA | 2900 |
CTTTTGGACT CGCCTTTGGG GGAAAAAATA TTAA | 2950 |
>AT5G61190.1 longest ORF length:977
MSTAEADYVK AKTSVWWDIE NCEVPRGWDA HVIALNVSSS LLKMNYCGPV | 50 |
SISAYGDTNL IPLHHQQALS STGVALNHIP AGVKDASDKK ILVDMLLWAI | 100 |
DNPAPANLLL ISGDRDFSNA LHQLRMRRYN ILLAQPPRAS VPLVAAARDV | 150 |
WLWTVLASGG PPLTSVESSL LFNNGGFRVS NKGVSKLPVS EQAQPSQPTG | 200 |
STSNAGDTKD HKTREKHVPR GSLQENRKNM LQHSSGATGE SATTCRICNV | 250 |
VCDSFEKFTA HLSDIRHISQ AAIVESRRAQ ASVSAKPIHQ AVLVEPLLCK | 300 |
VCQISFTNND TYKNHTYGKK HRNNLELQSG KSKNILVGPA EPSKEVLEKH | 350 |
NMNKKVMIES RAQANAEFVC LMCNVVCQSQ IVFNSHLRGK KHANMLSQSE | 400 |
ATLDQALIVS TKLQEKGVGE KEQPSETVAE LQLQSQKAQE KQVPMVLVDS | 450 |
KKLPEKGDEV KGQPKEMTAL RNASAKYICR MCNDQALIDS KKLQEKGFGE | 500 |
KEQPRETIVE PQLQSQNAQE NSKCFEKHVV MVNQSEVLIN ASKLEEKDAQ | 550 |
EKAQPIESIA EPQSQSQNTQ EHTKFFEKQN EELRKICGTL ESSVKEPLPS | 600 |
TKDWVETLNK QIPNGEFFFG DLRSDFEVPR EASECFDGIV KPVNLSKGET | 650 |
KHSWEAAFVA SNGSQSSVST NPLKEPEGLQ PVWCQVCQIS CNSKVAFASH | 700 |
TYGKKHRQNL ESQSAKNETM STGPGKLSKD YGEKTKKVSC KNQTTFDSQL | 750 |
KSQNHYTMAK ELVEKAFVSA FEHVSALEQF SIVDSRTIRE DTDQEKEATK | 800 |
EQTLVKMDGN GFRGAPEDKV ELNQEKHREA LEQFSIDSRI IREETDQEKE | 850 |
ATEEQTLVKM DDLGFRGAPE DKVELKERHT VSENLVHRVF TEQNRESRIP | 900 |
NEPRGCLDVI PERVKLPPNV NVAKNLEDEQ KHKPEPKAQE AENKSGGRKD | 950 |
LPGEAAKREE IKGQADNFWT RLWGKKY | 1000 |