fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G61270 PIF7, bHLH072 phytochrome-interacting factor7 (.1.2)

>AT5G61270.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HindIII, HpaI, NcoI, NdeI, NheI, NotI, PacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 475
KpnI GGTAC|C 334
PstI CTGCA|G 184
PvuII CAG|CTG 181
SacI GAGCT|C 22


Click here to view TAIR data

>AT5G61270.1 length:1101
ATGTCGAATT ATGGAGTTAA AGAGCTCACA TGGGAAAATG GGCAACTAAC 
50
CGTTCATGGT CTAGGCGACG AAGTAGAACC AACCACCTCG AATAACCCTA 
100
TTTGGACTCA AAGTCTCAAC GGTTGTGAGA CTTTGGAGTC TGTGGTTCAT 
150
CAAGCGGCTC TACAGCAGCC AAGCAAGTTT CAGCTGCAGA GTCCGAATGG 
200
TCCAAACCAC AATTATGAGA GCAAGGATGG ATCTTGTTCA AGAAAACGCG 
250
GTTATCCTCA AGAAATGGAC CGATGGTTCG CTGTTCAAGA GGAGAGCCAT 
300
AGAGTTGGCC ACAGCGTCAC TGCAAGTGCG AGTGGTACCA ATATGTCTTG 
350
GGCGTCTTTT GAATCCGGTC GGAGCTTGAA GACAGCTAGA ACCGGAGACA 
400
GAGACTATTT CCGCTCTGGA TCGGAAACTC AAGATACTGA AGGAGATGAA 
450
CAAGAGACAA GAGGAGAAGC AGGTAGATCT AATGGACGAC GGGGACGAGC 
500
AGCAGCGATT CACAACGAGT CCGAAAGGAG ACGGCGTGAT AGGATAAACC 
550
AGAGGATGAG AACACTTCAG AAGCTGCTTC CTACTGCAAG TAAGGCGGAT 
600
AAAGTCTCAA TCTTGGATGA TGTTATCGAA CACTTGAAAC AGCTACAAGC 
650
ACAAGTACAG TTCATGAGCC TAAGAGCCAA CTTGCCACAA CAAATGATGA 
700
TTCCGCAACT ACCTCCACCA CAGTCAGTTC TCAGCATCCA ACACCAACAA 
750
CAACAACAAC AACAGCAGCA GCAGCAGCAA CAACAGCAGC AACAGTTTCA 
800
GATGTCGTTG CTTGCAACAA TGGCAAGAAT GGGAATGGGA GGTGGTGGAA 
850
ATGGTTATGG AGGTTTAGTT CCTCCTCCTC CTCCTCCACC AATGATGGTC 
900
CCTCCTATGG GTAACAGAGA CTGCACCAAC GGTTCTTCAG CCACATTATC 
950
TGATCCATAC AGCGCCTTTT TCGCACAGAC AATGAATATG GATCTCTACA 
1000
ATAAAATGGC AGCAGCTATC TATAGACAAC AGTCTGATCA AACAACAAAG 
1050
GTAAATATCG GCATGCCTTC AAGTTCTTCG AATCATGAGA AAAGAGATTA 
1100
G
1150

>AT5G61270.1 longest ORF length:366
MSNYGVKELT WENGQLTVHG LGDEVEPTTS NNPIWTQSLN GCETLESVVH 
50
QAALQQPSKF QLQSPNGPNH NYESKDGSCS RKRGYPQEMD RWFAVQEESH 
100
RVGHSVTASA SGTNMSWASF ESGRSLKTAR TGDRDYFRSG SETQDTEGDE 
150
QETRGEAGRS NGRRGRAAAI HNESERRRRD RINQRMRTLQ KLLPTASKAD 
200
KVSILDDVIE HLKQLQAQVQ FMSLRANLPQ QMMIPQLPPP QSVLSIQHQQ 
250
QQQQQQQQQQ QQQQQFQMSL LATMARMGMG GGGNGYGGLV PPPPPPPMMV 
300
PPMGNRDCTN GSSATLSDPY SAFFAQTMNM DLYNKMAAAI YRQQSDQTTK 
350
VNIGMPSSSS NHEKRD
400