fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G61270 PIF7, bHLH072 phytochrome-interacting factor7 (.1.2)

>AT5G61270.2 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HindIII, HpaI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 211
KpnI GGTAC|C 70


Click here to view TAIR data

>AT5G61270.2 length:837
ATGGACCGAT GGTTCGCTGT TCAAGAGGAG AGCCATAGAG TTGGCCACAG 
50
CGTCACTGCA AGTGCGAGTG GTACCAATAT GTCTTGGGCG TCTTTTGAAT 
100
CCGGTCGGAG CTTGAAGACA GCTAGAACCG GAGACAGAGA CTATTTCCGC 
150
TCTGGATCGG AAACTCAAGA TACTGAAGGA GATGAACAAG AGACAAGAGG 
200
AGAAGCAGGT AGATCTAATG GACGACGGGG ACGAGCAGCA GCGATTCACA 
250
ACGAGTCCGA AAGGAGACGG CGTGATAGGA TAAACCAGAG GATGAGAACA 
300
CTTCAGAAGC TGCTTCCTAC TGCAAGTAAG GCGGATAAAG TCTCAATCTT 
350
GGATGATGTT ATCGAACACT TGAAACAGCT ACAAGCACAA GTACAGTTCA 
400
TGAGCCTAAG AGCCAACTTG CCACAACAAA TGATGATTCC GCAACTACCT 
450
CCACCACAGT CAGTTCTCAG CATCCAACAC CAACAACAAC AACAACAACA 
500
GCAGCAGCAG CAGCAACAAC AGCAGCAACA GTTTCAGATG TCGTTGCTTG 
550
CAACAATGGC AAGAATGGGA ATGGGAGGTG GTGGAAATGG TTATGGAGGT 
600
TTAGTTCCTC CTCCTCCTCC TCCACCAATG ATGGTCCCTC CTATGGGTAA 
650
CAGAGACTGC ACCAACGGTT CTTCAGCCAC ATTATCTGAT CCATACAGCG 
700
CCTTTTTCGC ACAGACAATG AATATGGATC TCTACAATAA AATGGCAGCA 
750
GCTATCTATA GACAACAGTC TGATCAAACA ACAAAGGTAA ATATCGGCAT 
800
GCCTTCAAGT TCTTCGAATC ATGAGAAAAG AGATTAG
850

>AT5G61270.2 longest ORF length:278
MDRWFAVQEE SHRVGHSVTA SASGTNMSWA SFESGRSLKT ARTGDRDYFR 
50
SGSETQDTEG DEQETRGEAG RSNGRRGRAA AIHNESERRR RDRINQRMRT 
100
LQKLLPTASK ADKVSILDDV IEHLKQLQAQ VQFMSLRANL PQQMMIPQLP 
150
PPQSVLSIQH QQQQQQQQQQ QQQQQQQFQM SLLATMARMG MGGGGNGYGG 
200
LVPPPPPPPM MVPPMGNRDC TNGSSATLSD PYSAFFAQTM NMDLYNKMAA 
250
AIYRQQSDQT TKVNIGMPSS SSNHEKRD
300