fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G61420 HAG1, PMG1, ATMYB28 PRODUCTION OF METHIONINE-DERIVED GLUCOSINOLATE 1, HIGH ALIPHATIC GLUCOSINOLATE 1, myb domain protein 28 (.1.2)

>AT5G61420.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRV, HpaI, KpnI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
EcoRI G|AATTC 186
HindIII A|AGCTT 477
NcoI C|CATGG 437
NdeI CA|TATG 858
SacI GAGCT|C 231
StyI C|C[AT][AT]GG 284, 437


Click here to view TAIR data

>AT5G61420.1 length:864
ATGCTTCATG CTTCTCGTGG CAACAAGTGG TCGGTCATAG CGAGACATTT 
50
ACCTAGAAGA ACAGACAACG AGATCAAGAA CTACTGGAAC ACGCATCTCA 
100
AAAAACGTTT GATGGAACAG GGTATTGATC CCGTGACTCA CAAGCCACTG 
150
GCTTCTAGTT CCAACCCTAC GGTCGATGAG AATTTGAATT CCCCAAATGC 
200
CTCTAGTTCC GACAAGCAAT ACTCCCGATC GAGCTCAATG CCTTTTCTGT 
250
CTCGTCCTCC TCCATCCAGT TGCAACATGG TTTCCAAGGT CTCCGAGCTT 
300
AGCAGCAATG ATGGGACACC GATTCAAGGC AGTTCCTTGA GTTGCAAGAA 
350
ACGTTTCAAG AAATCAAGTT CTACATCAAG GCTCTTGAAC AAAGTTGCGG 
400
CTAAGGCCAC TTCCATCAAA GATATATTGT CGGCTTCCAT GGAAGGTAGC 
450
TTGAGTGCTA CTACAATATC ACATGCAAGC TTTTTTAATG GCTTCACTGA 
500
GCAGATTCGC AATGAAGAGG ATAGTTCTAA CACATCCCTG ACAAATACTC 
550
TTGCTGAATT TGATCCCTTC TCCCCATCAT CGTTGTACCC CGAACATGAG 
600
ATCAATGCTA CTTCTGATCT CAACATGGAC CAAGATTACG ATTTTTCACA 
650
ATTTTTCGAA AAATTCGGAG GAGATAACCA CAATGAGGAG AACAGTATGA 
700
ATGATCTCCT TATGTCCGAT GTTTCCCAAG AAGTCTCATC AACTAGCGTT 
750
GATGATCAAG ACAATATGGT AGGAAACTTC GAGGGATGGT CAAATTATCT 
800
TCTTGACCAT ACCAATTTTA TGTATGACAC CGACTCAGAC TCGCTTGAAA 
850
AGCATTTCAT ATGA
900

>AT5G61420.1 longest ORF length:287
MLHASRGNKW SVIARHLPRR TDNEIKNYWN THLKKRLMEQ GIDPVTHKPL 
50
ASSSNPTVDE NLNSPNASSS DKQYSRSSSM PFLSRPPPSS CNMVSKVSEL 
100
SSNDGTPIQG SSLSCKKRFK KSSSTSRLLN KVAAKATSIK DILSASMEGS 
150
LSATTISHAS FFNGFTEQIR NEEDSSNTSL TNTLAEFDPF SPSSLYPEHE 
200
INATSDLNMD QDYDFSQFFE KFGGDNHNEE NSMNDLLMSD VSQEVSSTSV 
250
DDQDNMVGNF EGWSNYLLDH TNFMYDTDSD SLEKHFI
300