Locus |
Common name |
Short description |
AT5G61420 |
HAG1, PMG1, ATMYB28 |
PRODUCTION OF METHIONINE-DERIVED GLUCOSINOLATE 1, HIGH ALIPHATIC GLUCOSINOLATE 1, myb domain protein 28 (.1.2) |
>AT5G61420.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRV, HpaI, KpnI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, SpeI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
EcoRI
| G|AATTC |
186 |
HindIII
| A|AGCTT |
477 |
NcoI
| C|CATGG |
437 |
NdeI
| CA|TATG |
858 |
SacI
| GAGCT|C |
231 |
StyI
| C|C[AT][AT]GG |
284, 437 |
Click here to view TAIR data
>AT5G61420.1 length:864
ATGCTTCATG CTTCTCGTGG CAACAAGTGG TCGGTCATAG CGAGACATTT | 50 |
ACCTAGAAGA ACAGACAACG AGATCAAGAA CTACTGGAAC ACGCATCTCA | 100 |
AAAAACGTTT GATGGAACAG GGTATTGATC CCGTGACTCA CAAGCCACTG | 150 |
GCTTCTAGTT CCAACCCTAC GGTCGATGAG AATTTGAATT CCCCAAATGC | 200 |
CTCTAGTTCC GACAAGCAAT ACTCCCGATC GAGCTCAATG CCTTTTCTGT | 250 |
CTCGTCCTCC TCCATCCAGT TGCAACATGG TTTCCAAGGT CTCCGAGCTT | 300 |
AGCAGCAATG ATGGGACACC GATTCAAGGC AGTTCCTTGA GTTGCAAGAA | 350 |
ACGTTTCAAG AAATCAAGTT CTACATCAAG GCTCTTGAAC AAAGTTGCGG | 400 |
CTAAGGCCAC TTCCATCAAA GATATATTGT CGGCTTCCAT GGAAGGTAGC | 450 |
TTGAGTGCTA CTACAATATC ACATGCAAGC TTTTTTAATG GCTTCACTGA | 500 |
GCAGATTCGC AATGAAGAGG ATAGTTCTAA CACATCCCTG ACAAATACTC | 550 |
TTGCTGAATT TGATCCCTTC TCCCCATCAT CGTTGTACCC CGAACATGAG | 600 |
ATCAATGCTA CTTCTGATCT CAACATGGAC CAAGATTACG ATTTTTCACA | 650 |
ATTTTTCGAA AAATTCGGAG GAGATAACCA CAATGAGGAG AACAGTATGA | 700 |
ATGATCTCCT TATGTCCGAT GTTTCCCAAG AAGTCTCATC AACTAGCGTT | 750 |
GATGATCAAG ACAATATGGT AGGAAACTTC GAGGGATGGT CAAATTATCT | 800 |
TCTTGACCAT ACCAATTTTA TGTATGACAC CGACTCAGAC TCGCTTGAAA | 850 |
AGCATTTCAT ATGA | 900 |
>AT5G61420.1 longest ORF length:287
MLHASRGNKW SVIARHLPRR TDNEIKNYWN THLKKRLMEQ GIDPVTHKPL | 50 |
ASSSNPTVDE NLNSPNASSS DKQYSRSSSM PFLSRPPPSS CNMVSKVSEL | 100 |
SSNDGTPIQG SSLSCKKRFK KSSSTSRLLN KVAAKATSIK DILSASMEGS | 150 |
LSATTISHAS FFNGFTEQIR NEEDSSNTSL TNTLAEFDPF SPSSLYPEHE | 200 |
INATSDLNMD QDYDFSQFFE KFGGDNHNEE NSMNDLLMSD VSQEVSSTSV | 250 |
DDQDNMVGNF EGWSNYLLDH TNFMYDTDSD SLEKHFI | 300 |
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