fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G61420 HAG1, PMG1, ATMYB28 PRODUCTION OF METHIONINE-DERIVED GLUCOSINOLATE 1, HIGH ALIPHATIC GLUCOSINOLATE 1, myb domain protein 28 (.1.2)

>AT5G61420.2 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRV, HpaI, KpnI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
EcoRI G|AATTC 423
HindIII A|AGCTT 714
NcoI C|CATGG 674
NdeI CA|TATG 1095
SacI GAGCT|C 468
StyI C|C[AT][AT]GG 521, 674


Click here to view TAIR data

>AT5G61420.2 length:1101
ATGTCAAGAA AGCCATGTTG CGTCGGAGAA GGCTTGAAGA AAGGAGCATG 
50
GACCACCGAG GAGGACAAGA AACTCATCTC TTACATCCAC GACCACGGCG 
100
AGGGAGGCTG GCGCGACATT CCCCAAAAAG CTGGGTTGAA ACGGTGTGGA 
150
AAGAGTTGTA GACTGCGATG GACCAACTAC CTTAAACCTG AGATCAAAAG 
200
AGGCGAGTTT AGTTCAGAGG AAGAGCAGAT TATCATCATG CTTCATGCTT 
250
CTCGTGGCAA CAAGTGGTCG GTCATAGCGA GACATTTACC TAGAAGAACA 
300
GACAACGAGA TCAAGAACTA CTGGAACACG CATCTCAAAA AACGTTTGAT 
350
GGAACAGGGT ATTGATCCCG TGACTCACAA GCCACTGGCT TCTAGTTCCA 
400
ACCCTACGGT CGATGAGAAT TTGAATTCCC CAAATGCCTC TAGTTCCGAC 
450
AAGCAATACT CCCGATCGAG CTCAATGCCT TTTCTGTCTC GTCCTCCTCC 
500
ATCCAGTTGC AACATGGTTT CCAAGGTCTC CGAGCTTAGC AGCAATGATG 
550
GGACACCGAT TCAAGGCAGT TCCTTGAGTT GCAAGAAACG TTTCAAGAAA 
600
TCAAGTTCTA CATCAAGGCT CTTGAACAAA GTTGCGGCTA AGGCCACTTC 
650
CATCAAAGAT ATATTGTCGG CTTCCATGGA AGGTAGCTTG AGTGCTACTA 
700
CAATATCACA TGCAAGCTTT TTTAATGGCT TCACTGAGCA GATTCGCAAT 
750
GAAGAGGATA GTTCTAACAC ATCCCTGACA AATACTCTTG CTGAATTTGA 
800
TCCCTTCTCC CCATCATCGT TGTACCCCGA ACATGAGATC AATGCTACTT 
850
CTGATCTCAA CATGGACCAA GATTACGATT TTTCACAATT TTTCGAAAAA 
900
TTCGGAGGAG ATAACCACAA TGAGGAGAAC AGTATGAATG ATCTCCTTAT 
950
GTCCGATGTT TCCCAAGAAG TCTCATCAAC TAGCGTTGAT GATCAAGACA 
1000
ATATGGTAGG AAACTTCGAG GGATGGTCAA ATTATCTTCT TGACCATACC 
1050
AATTTTATGT ATGACACCGA CTCAGACTCG CTTGAAAAGC ATTTCATATG 
1100
A
1150

>AT5G61420.2 longest ORF length:366
MSRKPCCVGE GLKKGAWTTE EDKKLISYIH DHGEGGWRDI PQKAGLKRCG 
50
KSCRLRWTNY LKPEIKRGEF SSEEEQIIIM LHASRGNKWS VIARHLPRRT 
100
DNEIKNYWNT HLKKRLMEQG IDPVTHKPLA SSSNPTVDEN LNSPNASSSD 
150
KQYSRSSSMP FLSRPPPSSC NMVSKVSELS SNDGTPIQGS SLSCKKRFKK 
200
SSSTSRLLNK VAAKATSIKD ILSASMEGSL SATTISHASF FNGFTEQIRN 
250
EEDSSNTSLT NTLAEFDPFS PSSLYPEHEI NATSDLNMDQ DYDFSQFFEK 
300
FGGDNHNEEN SMNDLLMSDV SQEVSSTSVD DQDNMVGNFE GWSNYLLDHT 
350
NFMYDTDSDS LEKHFI
400