Locus |
Common name |
Short description |
AT5G61430 |
ANAC100, ATNAC5 |
NAC domain containing protein 100 (.1) |
>AT5G61430.1 CDS map
>>Show genomic map

Uncut enzymes: AatII, Acc65I, AccII(FnuDII), AccIII(BspMII), AclI, AfeI, AflII, AflIII, AhdI, AlwI, AlwNI, Aor51HI(Eco47III), ApaI, ApaLI, AscI, AseI, AvaI, AvrII, BaeI, BalI, BamHI, BanI, BbsI, BbvCI, BbvI, BcgI, BciVI, BclI, BfaI, BglI, BglII, BlpI, BmrI, BpmI, BsaBI, BsaHI, BsaI, BsaXI, BseRI, BsgI, BsiWI, BsmAI, BsmBI, BsmFI, BsmI, BsoBI, BspDI, BspEI, BspHI, BspMI, BspT107I(HgiCI), BsrBI, BsrDI, BsrGI, BssHII, BssSI, BstAPI, BstBI, BstEII, BstUI, BstXI, BstZ17I, Bsu36I, BtrI, BtsI, Cac8I, ClaI, DraIII, DrdI, EaeI, EagI, EarI, EciI, EcoNI, EcoO109I, EcoRI, FauI, FokI, FseI, FspI, HaeII, HaeIII, HgaI, HhaI, HinP1I, HincII, HindIII, HpaI, HphI, Hpy99I, I-CeuI, I-SceI, KasI, KpnI, MboII, MluI, MlyI, MnlI, MscI, MslI, MspA1I, NaeI, , NarI, NdeI, NgoMIV, NheI, NotI, NruI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PciI, PflMI, PleI, PmeI, PmlI, PpuMI, PshAI, PsiI, PspOMI, PstI, PvuI, PvuII, RsrII, SacII, SalI, SapI, SbfI, ScaI, SexAI, SfaNI, SfiI, SfoI, SgrAI, SmaI, SnaBI, SpeI, SphI, SspI, StuI, SwaI, TliI, Tsp45I, XbaI, XhoI, XmaI
Name |
Recognition sequence |
Cut positions |
AccI
| GT|[AC][TG]AC |
631 |
AciI
| C|CGC |
456 |
AgeI
| A|CCGGT |
250, 627, 978 |
AluI
| AG|CT |
122, 130, 136, 373 |
ApoI
| Pu|AATTPy |
430, 925 |
AvaII
| G|G[AT]CC |
975 |
BanII
| GPuGCPy|C |
374, 786 |
BsaAI
| PyAC|GTPu |
634 |
BsaJI
| C|CNNGG |
52, 172, 184, 321, 669 |
BsaWI
| [AT]|CCGG[AT] |
250, 627, 880, 978 |
BsiEI
| CGPuPy|CG |
296 |
BsiHKAI
| G[AT]GC[AT]|C |
374 |
BslI
| CCNNNNN|NNGG |
107, 286 |
Bsp1286I
| G[GAT]GC[CAT]|C |
374, 637, 786 |
BsrFI
| Pu|CCGGPy |
250, 280, 627, 978 |
BsrI
| ACTGGN| |
398, 973 |
BssKI
| |CCNGG |
51, 298, 764, 788 |
BstF5I
| GGATGNN| |
189, 342 |
BstNI
| CC|[AT]GG |
51, 764 |
BstYI
| Pu|GATCPy |
515, 957 |
BtgI
| C|CPuPyGG |
172, 184 |
Cfr10I
| [AG]|CCGG[TC] |
250, 280, 627, 978 |
DdeI
| C|TNAG |
128, 754, 809 |
DpnI
| GA-CH3|TC |
514, 659, 712, 826, 956, 983 |
DpnII
| |GATC |
514, 659, 712, 826, 956, 983 |
DraI
| TTT|AAA |
156 |
EcoRV
| GAT|ATC |
907 |
Fnu4HI
| GC|NGC |
694 |
HinfI
| G|ANTC |
527, 538, 591, 737, 776, 945 |
HpaII
| C|CGG |
249, 279, 297, 626, 788, 879, 977 |
Hpy188I
| TCN|GA |
165, 386, 535, 550, 915 |
HpyCH4III
| ACN|GT |
938 |
HpyCH4IV
| A|CGT |
633 |
HpyCH4V
| TG|CA |
405, 479 |
MboI
| |GATC |
514, 659, 712, 826, 956, 983 |
MfeI
| C|AATTG |
684 |
MseI
| T|TAA |
155, 254, 561, 584, 705 |
MspI
| C|CGG |
249, 279, 297, 626, 788, 879, 977 |
MwoI
| GCNNNNN|NNGC |
276, 694 |
N.BstNBI
| GAGTCNNNN|N |
532 |
NciI
| CC|[CG]GG |
298, 788 |
NcoI
| C|CATGG |
172, 184 |
NlaIII
| CATG| |
171, 183, 407, 818, 895 |
NlaIV
| GGN|NCC |
553, 673 |
NsiI
| ATGCA|T |
406 |
NspI
| PuCATG|Py |
819 |
PflFI
| GACN|NNGTC |
848 |
PspGI
| |CC[AT]GG |
51, 764 |
RsaI
| GT|AC |
412 |
SacI
| GAGCT|C |
374 |
Sau3AI
| |GATC |
514, 659, 712, 826, 956, 983 |
Sau96I
| G|GNCC |
975 |
ScrFI
| CC|NGG |
51, 298, 764, 788 |
SfcI
| C|TPuPyAG |
363, 781 |
SmlI
| C|TPyPuAG |
950 |
StyI
| C|C[AT][AT]GG |
172, 184, 669 |
Taqƒ¿I
| T|CGA |
524, 710, 828 |
TfiI
| G|A[AT]TC |
538, 591, 737, 776, 945 |
TseI
| G|C[AT]GC |
694 |
Tsp509I
| |AATT |
429, 683, 924, 1001 |
TspRI
| NNCA[CG]TGNN| |
904 |
Tth111I
| GACN|NNGTC |
848 |
XcmI
| CCANNNNN|NNNNTGG |
501 |
XmnI
| GAANN|NNTTC |
543 |
Click here to view TAIR data
>AT5G61430.1 length:1011
ATGGAGACTT TTTGTGGGTT TCAAAAGGAG GAAGAGCAGA TGGATTTACC | 50 |
TCCTGGGTTC AGGTTTCATC CAACAGATGA AGAACTCATA ACTCACTATC | 100 |
TCCATAAGAA GGTTCTTGAC ACCAGCTTCT CAGCTAAAGC TATCGGTGAA | 150 |
GTTGATTTAA ACAAATCAGA GCCATGGGAG TTACCATGGA TGGCAAAAAT | 200 |
GGGTGAGAAA GAATGGTATT TTTTCTGTGT GAGAGACAGA AAGTATCCCA | 250 |
CCGGTTTAAG AACTAACCGA GCAACTGAAG CCGGTTATTG GAAGGCGACC | 300 |
GGGAAGGATA AAGAGATATA CCGAGGCAAA TCACTTGTTG GGATGAAGAA | 350 |
GACACTTGTT TTCTATAGAG GAAGAGCTCC TAAAGGTCAG AAAACCAACT | 400 |
GGGTGATGCA TGAGTACAGG CTTGAAGGAA AATTCTCTGC CCATAACTTG | 450 |
CCGAAAACCG CAAAGAATGA ATGGGTGATA TGCAGGGTGT TCCAAAAGAG | 500 |
TGCTGGAGGG AAGAAGATCC CGATTTCGAG TCTAATCCGA ATCGGTTCAC | 550 |
TCGGAACCGA CTTTAACCCT TCGCTTTTGC CCTCTTTAAC CGATTCTTCG | 600 |
CCTTACAACG ATAAAACCAA AACAGAACCG GTCTACGTGC CCTGCTTCTC | 650 |
CAACCAAACG GATCAAAACC AAGGAACCAC ACTCAATTGC TTCAGCAGCC | 700 |
CTGTTCTTAA CTCGATCCAA GCCGACATTT TTCACAGGAT TCCACTCTAT | 750 |
CAAACTCAGT CCCTCCAGGT TTCTATGAAT CTACAGAGCC CGGTTCTCAC | 800 |
GCAAGAACAC TCAGTTCTAC ATGCTATGAT CGAGAACAAC AGAAGACAAA | 850 |
GTCTCAAAAC GATGAGTGTC TCACAAGAAA CCGGAGTTTC AACTGACATG | 900 |
AACACTGATA TCTCATCGGA TTTTGAATTT GGTAAGAGAC GGTTTGATTC | 950 |
TCAAGAAGAT CCGTCTTCCT CTACTGGACC GGTTGATCTT GAACCTTTCT | 1000 |
GGAATTACTG A | 1050 |
>AT5G61430.1 longest ORF length:336
METFCGFQKE EEQMDLPPGF RFHPTDEELI THYLHKKVLD TSFSAKAIGE | 50 |
VDLNKSEPWE LPWMAKMGEK EWYFFCVRDR KYPTGLRTNR ATEAGYWKAT | 100 |
GKDKEIYRGK SLVGMKKTLV FYRGRAPKGQ KTNWVMHEYR LEGKFSAHNL | 150 |
PKTAKNEWVI CRVFQKSAGG KKIPISSLIR IGSLGTDFNP SLLPSLTDSS | 200 |
PYNDKTKTEP VYVPCFSNQT DQNQGTTLNC FSSPVLNSIQ ADIFHRIPLY | 250 |
QTQSLQVSMN LQSPVLTQEH SVLHAMIENN RRQSLKTMSV SQETGVSTDM | 300 |
NTDISSDFEF GKRRFDSQED PSSSTGPVDL EPFWNY | 350 |
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