fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G61430 ANAC100, ATNAC5 NAC domain containing protein 100 (.1)

>AT5G61430.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, HindIII, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
EcoRV GAT|ATC 907
NcoI C|CATGG 172, 184
SacI GAGCT|C 374
StyI C|C[AT][AT]GG 172, 184, 669


Click here to view TAIR data

>AT5G61430.1 length:1011
ATGGAGACTT TTTGTGGGTT TCAAAAGGAG GAAGAGCAGA TGGATTTACC 
50
TCCTGGGTTC AGGTTTCATC CAACAGATGA AGAACTCATA ACTCACTATC 
100
TCCATAAGAA GGTTCTTGAC ACCAGCTTCT CAGCTAAAGC TATCGGTGAA 
150
GTTGATTTAA ACAAATCAGA GCCATGGGAG TTACCATGGA TGGCAAAAAT 
200
GGGTGAGAAA GAATGGTATT TTTTCTGTGT GAGAGACAGA AAGTATCCCA 
250
CCGGTTTAAG AACTAACCGA GCAACTGAAG CCGGTTATTG GAAGGCGACC 
300
GGGAAGGATA AAGAGATATA CCGAGGCAAA TCACTTGTTG GGATGAAGAA 
350
GACACTTGTT TTCTATAGAG GAAGAGCTCC TAAAGGTCAG AAAACCAACT 
400
GGGTGATGCA TGAGTACAGG CTTGAAGGAA AATTCTCTGC CCATAACTTG 
450
CCGAAAACCG CAAAGAATGA ATGGGTGATA TGCAGGGTGT TCCAAAAGAG 
500
TGCTGGAGGG AAGAAGATCC CGATTTCGAG TCTAATCCGA ATCGGTTCAC 
550
TCGGAACCGA CTTTAACCCT TCGCTTTTGC CCTCTTTAAC CGATTCTTCG 
600
CCTTACAACG ATAAAACCAA AACAGAACCG GTCTACGTGC CCTGCTTCTC 
650
CAACCAAACG GATCAAAACC AAGGAACCAC ACTCAATTGC TTCAGCAGCC 
700
CTGTTCTTAA CTCGATCCAA GCCGACATTT TTCACAGGAT TCCACTCTAT 
750
CAAACTCAGT CCCTCCAGGT TTCTATGAAT CTACAGAGCC CGGTTCTCAC 
800
GCAAGAACAC TCAGTTCTAC ATGCTATGAT CGAGAACAAC AGAAGACAAA 
850
GTCTCAAAAC GATGAGTGTC TCACAAGAAA CCGGAGTTTC AACTGACATG 
900
AACACTGATA TCTCATCGGA TTTTGAATTT GGTAAGAGAC GGTTTGATTC 
950
TCAAGAAGAT CCGTCTTCCT CTACTGGACC GGTTGATCTT GAACCTTTCT 
1000
GGAATTACTG A
1050

>AT5G61430.1 longest ORF length:336
METFCGFQKE EEQMDLPPGF RFHPTDEELI THYLHKKVLD TSFSAKAIGE 
50
VDLNKSEPWE LPWMAKMGEK EWYFFCVRDR KYPTGLRTNR ATEAGYWKAT 
100
GKDKEIYRGK SLVGMKKTLV FYRGRAPKGQ KTNWVMHEYR LEGKFSAHNL 
150
PKTAKNEWVI CRVFQKSAGG KKIPISSLIR IGSLGTDFNP SLLPSLTDSS 
200
PYNDKTKTEP VYVPCFSNQT DQNQGTTLNC FSSPVLNSIQ ADIFHRIPLY 
250
QTQSLQVSMN LQSPVLTQEH SVLHAMIENN RRQSLKTMSV SQETGVSTDM 
300
NTDISSDFEF GKRRFDSQED PSSSTGPVDL EPFWNY
350