fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G61470 C2H2-like zinc finger protein (.1)

>AT5G61470.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 249
HindIII A|AGCTT 174
SacI GAGCT|C 86
StyI C|C[AT][AT]GG 165


Click here to view TAIR data

>AT5G61470.1 length:915
ATGTATTCAC TTCTCAAGAA AACAAAAATC TGTCAGGTGT GCAAGAAATC 
50
ATTTTCAAAC GGGAAAGCTC TTGGTGGTCA CATGAGAGCT CACACTTTGA 
100
AATTTTTCCC TGGATCATCT TCATCAACTG GCTCGATCAC TCCATCACTA 
150
CGATCATGCA ACAACCTTGG AGCAAGCTTT AGAAGACCTA ATGAAACAGT 
200
TCTGGCGAGA TTTGTCCACA CCAGTGAAGT TGTTGGTGGT CCAAAGCCAG 
250
ATCTAAACAA AGAAGCTGAG CAACGAACAA CTGTCAAGAA AAAGATCGTC 
300
GTGGATTTGG AAGAGGAAAA TTCGATAGAG TCTGAAAGCG ATATAACTAT 
350
TGAAGAAAGT GCTTTATGTC TTTTACAAAT GAAGGATGAC AACATGTCAG 
400
AATATCTTCA GAATCTGAAA TCGATTGATA GTTTGGTATC AACTCGAAAA 
450
AGAAAAGATA CTGAAAACTA TATCGAAATA GATTCTGATG AAAATCACGA 
500
AGATAGTGAT GATGAGTACG TTGTTGAAGA TGAAGATGAA GACAATGAAG 
550
ATGACGATGT TAAGTCTCTC ACTTCAGATG TGGAAAACCT AATAGGAGAC 
600
AGCGATGAAG ATGATGATGA TTATGGTGAT GAAAACGCAT ATTACGGTGG 
650
AAAAAGGAAA AGGGGTAAGA AACAAAGTAA ATATACGTGT GATACTTGTG 
700
GAAAAGTTTT ACGTTCGTAT CAGGCATTAG GTGGTCATCG AACGAGCCAC 
750
AAATACAAGC GATTGAAGAT TTCCGACAAG AATTATTTCG GGGAAGATGG 
800
GCCAATAGTT CGACGACAAT ACGAGTGTCA AATTTGTAAC AGAATGTTTG 
850
CATCTGGTCA AGCACTTGGT GGTCACAAAA AGATTCACTA TATGTTCCTA 
900
GCTCCAGCCA AGTAA
950

>AT5G61470.1 longest ORF length:304
MYSLLKKTKI CQVCKKSFSN GKALGGHMRA HTLKFFPGSS SSTGSITPSL 
50
RSCNNLGASF RRPNETVLAR FVHTSEVVGG PKPDLNKEAE QRTTVKKKIV 
100
VDLEEENSIE SESDITIEES ALCLLQMKDD NMSEYLQNLK SIDSLVSTRK 
150
RKDTENYIEI DSDENHEDSD DEYVVEDEDE DNEDDDVKSL TSDVENLIGD 
200
SDEDDDDYGD ENAYYGGKRK RGKKQSKYTC DTCGKVLRSY QALGGHRTSH 
250
KYKRLKISDK NYFGEDGPIV RRQYECQICN RMFASGQALG GHKKIHYMFL 
300
APAK
350