Locus |
Common name |
Short description |
AT5G61600 |
ERF104 |
ethylene response factor 104 (.1) |
>AT5G61600.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BglII, EcoRV, HpaI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI
Name |
Recognition sequence |
Cut positions |
BamHI
| G|GATCC |
312 |
EcoRI
| G|AATTC |
165 |
HindIII
| A|AGCTT |
17 |
KpnI
| GGTAC|C |
606 |
NcoI
| C|CATGG |
68 |
StyI
| C|C[AT][AT]GG |
68 |
XhoI
| C|TCGAG |
213 |
Click here to view TAIR data
>AT5G61600.1 length:726
ATGGCAACTA AACAAGAAGC TTTAGCCATC GATTTCATAA GCCAACACCT | 50 |
TCTCACAGAC TTTGTTTCCA TGGAAACTGA TCACCCATCT CTTTTTACCA | 100 |
ACCAACTTCA CAACTTTCAC TCAGAAACAG GCCCTAGAAC CATCACCAAC | 150 |
CAATCCCCTA AACCGAATTC GACTCTTAAC CAGCGTAAAC CGCCCTTACC | 200 |
GAATCTATCC GTCTCGAGAA CGGTTTCAAC AAAGACAGAG AAAGAGGAAG | 250 |
AAGAGAGGCA CTACAGGGGA GTGAGACGAA GACCGTGGGG AAAATACGCG | 300 |
GCGGAGATTA GGGATCCGAA CAAAAAGGGT TGTAGGATCT GGCTTGGGAC | 350 |
TTACGACACT GCCGTGGAAG CTGGAAGAGC TTATGACCAA GCGGCGTTTC | 400 |
AATTACGTGG AAGAAAAGCA ATCTTGAATT TCCCTCTCGA TGTTAGGGTT | 450 |
ACGTCAGAAA CTTGTTCTGG GGAAGGAGTT ATCGGATTAG GGAAACGAAA | 500 |
GCGAGATAAG GGTTCTCCGC CGGAAGAGGA GAAGGCGGCT AGGGTTAAAG | 550 |
TGGAGGAAGA AGAGAGTAAT ACGTCGGAGA CGACGGAGGC TGAGGTTGAG | 600 |
CCGGTGGTAC CATTGACGCC GTCAAGTTGG ATGGGGTTTT GGGATGTGGG | 650 |
AGCAGGAGAT GGTATTTTCA GTATTCCTCC GTTATCTCCG ACGTCTCCCA | 700 |
ACTTTTCCGT TATCTCCGTC ACTTAA | 750 |
>AT5G61600.1 longest ORF length:241
MATKQEALAI DFISQHLLTD FVSMETDHPS LFTNQLHNFH SETGPRTITN | 50 |
QSPKPNSTLN QRKPPLPNLS VSRTVSTKTE KEEEERHYRG VRRRPWGKYA | 100 |
AEIRDPNKKG CRIWLGTYDT AVEAGRAYDQ AAFQLRGRKA ILNFPLDVRV | 150 |
TSETCSGEGV IGLGKRKRDK GSPPEEEKAA RVKVEEEESN TSETTEAEVE | 200 |
PVVPLTPSSW MGFWDVGAGD GIFSIPPLSP TSPNFSVISV T | 250 |
|