fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G61600 ERF104 ethylene response factor 104 (.1)

>AT5G61600.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BglII, EcoRV, HpaI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI
Name Recognition sequence Cut positions
BamHI G|GATCC 312
EcoRI G|AATTC 165
HindIII A|AGCTT 17
KpnI GGTAC|C 606
NcoI C|CATGG 68
StyI C|C[AT][AT]GG 68
XhoI C|TCGAG 213


Click here to view TAIR data

>AT5G61600.1 length:726
ATGGCAACTA AACAAGAAGC TTTAGCCATC GATTTCATAA GCCAACACCT 
50
TCTCACAGAC TTTGTTTCCA TGGAAACTGA TCACCCATCT CTTTTTACCA 
100
ACCAACTTCA CAACTTTCAC TCAGAAACAG GCCCTAGAAC CATCACCAAC 
150
CAATCCCCTA AACCGAATTC GACTCTTAAC CAGCGTAAAC CGCCCTTACC 
200
GAATCTATCC GTCTCGAGAA CGGTTTCAAC AAAGACAGAG AAAGAGGAAG 
250
AAGAGAGGCA CTACAGGGGA GTGAGACGAA GACCGTGGGG AAAATACGCG 
300
GCGGAGATTA GGGATCCGAA CAAAAAGGGT TGTAGGATCT GGCTTGGGAC 
350
TTACGACACT GCCGTGGAAG CTGGAAGAGC TTATGACCAA GCGGCGTTTC 
400
AATTACGTGG AAGAAAAGCA ATCTTGAATT TCCCTCTCGA TGTTAGGGTT 
450
ACGTCAGAAA CTTGTTCTGG GGAAGGAGTT ATCGGATTAG GGAAACGAAA 
500
GCGAGATAAG GGTTCTCCGC CGGAAGAGGA GAAGGCGGCT AGGGTTAAAG 
550
TGGAGGAAGA AGAGAGTAAT ACGTCGGAGA CGACGGAGGC TGAGGTTGAG 
600
CCGGTGGTAC CATTGACGCC GTCAAGTTGG ATGGGGTTTT GGGATGTGGG 
650
AGCAGGAGAT GGTATTTTCA GTATTCCTCC GTTATCTCCG ACGTCTCCCA 
700
ACTTTTCCGT TATCTCCGTC ACTTAA
750

>AT5G61600.1 longest ORF length:241
MATKQEALAI DFISQHLLTD FVSMETDHPS LFTNQLHNFH SETGPRTITN 
50
QSPKPNSTLN QRKPPLPNLS VSRTVSTKTE KEEEERHYRG VRRRPWGKYA 
100
AEIRDPNKKG CRIWLGTYDT AVEAGRAYDQ AAFQLRGRKA ILNFPLDVRV 
150
TSETCSGEGV IGLGKRKRDK GSPPEEEKAA RVKVEEEESN TSETTEAEVE 
200
PVVPLTPSSW MGFWDVGAGD GIFSIPPLSP TSPNFSVISV T
250