Locus |
Common name |
Short description |
AT5G61890 |
|
Integrase-type DNA-binding superfamily protein (.1) |
>AT5G61890.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, NdeI, NheI, NotI, PacI, PstI, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
KpnI
| GGTAC|C |
592 |
NcoI
| C|CATGG |
289 |
PvuII
| CAG|CTG |
305 |
StyI
| C|C[AT][AT]GG |
243, 289 |
Click here to view TAIR data
>AT5G61890.1 length:747
ATGTATGGGA AGAGGCCTTT TGGAGGTGAT GAATCTGAAG AAAGGGAAGA | 50 |
AGATGAGAAC TTGTTCCCGG TCTTCTCGGC CCGATCTCAA CACGACATGC | 100 |
GTGTTATGGT CTCGGCCTTG ACTCAAGTAA TCGGAAACCA ACAAAGCAAA | 150 |
TCTCATGATA ACATCAGCTC TATTGATGAT AACTATCCTT CTGTGTATAA | 200 |
TCCACAAGAC CCTAATCAAC AAGTTGCGCC TACTCATCAA GACCAAGGGG | 250 |
ACTTGAGGAG GAGACATTAT AGAGGTGTAA GGCAAAGGCC ATGGGGAAAG | 300 |
TGGGCAGCTG AAATCCGAGA CCCAAAAAAG GCGGCACGTG TGTGGCTCGG | 350 |
GACATTTGAA ACCGCTGAAT CTGCGGCCTT AGCTTATGAT GAAGCAGCCC | 400 |
TAAAGTTCAA AGGAAGCAAA GCAAAACTCA ATTTCCCGGA GAGGGTTCAG | 450 |
CTTGGAAGTA ACTCTACATA TTACTCCTCC AACCAAATTC CACAAATGGA | 500 |
ACCACAAAGT ATACCGAACT ATAATCAATA CTATCATGAT GCGAGTAGTG | 550 |
GTGATATGCT AAGTTTTAAT TTGGGCGGTG GGTATGGGAG TGGTACCGGA | 600 |
TATTCAATGT CTCATGATAA TAGTACTACG ACTGCTGCTA CAACTTCTTC | 650 |
GTCTTCTGGT GGCTCTTCTA GGCAACAAGA AGAGCAAGAT TATGCCAGAT | 700 |
TCTGGCGCTT TGGGGATTCT TCTTCCTCTC CTCATTCGGG ATATTAA | 750 |
>AT5G61890.1 longest ORF length:248
MYGKRPFGGD ESEEREEDEN LFPVFSARSQ HDMRVMVSAL TQVIGNQQSK | 50 |
SHDNISSIDD NYPSVYNPQD PNQQVAPTHQ DQGDLRRRHY RGVRQRPWGK | 100 |
WAAEIRDPKK AARVWLGTFE TAESAALAYD EAALKFKGSK AKLNFPERVQ | 150 |
LGSNSTYYSS NQIPQMEPQS IPNYNQYYHD ASSGDMLSFN LGGGYGSGTG | 200 |
YSMSHDNSTT TAATTSSSSG GSSRQQEEQD YARFWRFGDS SSSPHSGY | 250 |
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