Locus |
Common name |
Short description |
AT5G62020 |
AT-HSFB2A |
ARABIDOPSIS THALIANA HEAT SHOCK TRANSCRIPTION FACTOR B2A, heat shock transcription factor B2A (.1) |
>AT5G62020.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
BglII
| A|GATCT |
52 |
EcoRI
| G|AATTC |
3 |
HindIII
| A|AGCTT |
541 |
Click here to view TAIR data
>AT5G62020.1 length:900
ATGAATTCGC CGCCGGTTGA CGCAATGATT ACCGGAGAAT CATCGTCACA | 50 |
AAGATCTATC CCAACGCCGT TTCTCACAAA AACGTTTAAC CTCGTTGAAG | 100 |
ATAGTTCCAT CGACGATGTT ATCTCATGGA ACGAAGATGG TTCCTCTTTC | 150 |
ATCGTATGGA ATCCGACAGA TTTCGCTAAA GATTTGCTTC CTAAACACTT | 200 |
CAAACACAAC AATTTCTCTA GTTTCGTTCG TCAGCTCAAC ACTTACGGAT | 250 |
TCAAAAAAGT TGTACCGGAT CGATGGGAGT TTTCAAACGA TTTCTTTAAG | 300 |
AGAGGAGAAA AACGTCTTCT CCGTGAGATC CAACGTCGGA AAATAACAAC | 350 |
GACGCATCAA ACAGTTGTTG CTCCTTCGTC GGAACAACGA AACCAGACGA | 400 |
TGGTTGTATC ACCGTCAAAT TCCGGGGAAG ATAATAATAA TAATCAGGTG | 450 |
ATGTCTTCGT CTCCGTCGTC GTGGTATTGT CATCAAACGA AGACGACTGG | 500 |
GAATGGTGGT TTATCAGTGG AGTTATTGGA AGAGAACGAG AAGCTTCGGA | 550 |
GTCAAAACAT TCAGCTAAAC CGTGAGCTTA CTCAGATGAA ATCTATCTGC | 600 |
GATAATATCT ATAGTCTCAT GTCGAATTAC GTCGGATCTC AGCCCACTGA | 650 |
TCGGAGTTAT TCTCCCGGAG GTAGTAGTAG TCAACCGATG GAGTTTTTAC | 700 |
CGGCGAAGCG GTTTTCGGAG ATGGAGATTG AAGAAGAAGA AGAAGCGAGT | 750 |
CCGAGGTTGT TTGGTGTTCC GATTGGGTTA AAACGGACGA GAAGTGAAGG | 800 |
TGTTCAGGTG AAGACGACGG CGGTGGTTGG GGAAAATTCC GATGAGGAGA | 850 |
CGCCGTGGTT GAGACATTAT AATCGAACCA ATCAGAGAGT TTGTAATTAA | 900 |
>AT5G62020.1 longest ORF length:299
MNSPPVDAMI TGESSSQRSI PTPFLTKTFN LVEDSSIDDV ISWNEDGSSF | 50 |
IVWNPTDFAK DLLPKHFKHN NFSSFVRQLN TYGFKKVVPD RWEFSNDFFK | 100 |
RGEKRLLREI QRRKITTTHQ TVVAPSSEQR NQTMVVSPSN SGEDNNNNQV | 150 |
MSSSPSSWYC HQTKTTGNGG LSVELLEENE KLRSQNIQLN RELTQMKSIC | 200 |
DNIYSLMSNY VGSQPTDRSY SPGGSSSQPM EFLPAKRFSE MEIEEEEEAS | 250 |
PRLFGVPIGL KRTRSEGVQV KTTAVVGENS DEETPWLRHY NRTNQRVCN | 300 |
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