fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G62020 AT-HSFB2A ARABIDOPSIS THALIANA HEAT SHOCK TRANSCRIPTION FACTOR B2A, heat shock transcription factor B2A (.1)

>AT5G62020.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 52
EcoRI G|AATTC 3
HindIII A|AGCTT 541


Click here to view TAIR data

>AT5G62020.1 length:900
ATGAATTCGC CGCCGGTTGA CGCAATGATT ACCGGAGAAT CATCGTCACA 
50
AAGATCTATC CCAACGCCGT TTCTCACAAA AACGTTTAAC CTCGTTGAAG 
100
ATAGTTCCAT CGACGATGTT ATCTCATGGA ACGAAGATGG TTCCTCTTTC 
150
ATCGTATGGA ATCCGACAGA TTTCGCTAAA GATTTGCTTC CTAAACACTT 
200
CAAACACAAC AATTTCTCTA GTTTCGTTCG TCAGCTCAAC ACTTACGGAT 
250
TCAAAAAAGT TGTACCGGAT CGATGGGAGT TTTCAAACGA TTTCTTTAAG 
300
AGAGGAGAAA AACGTCTTCT CCGTGAGATC CAACGTCGGA AAATAACAAC 
350
GACGCATCAA ACAGTTGTTG CTCCTTCGTC GGAACAACGA AACCAGACGA 
400
TGGTTGTATC ACCGTCAAAT TCCGGGGAAG ATAATAATAA TAATCAGGTG 
450
ATGTCTTCGT CTCCGTCGTC GTGGTATTGT CATCAAACGA AGACGACTGG 
500
GAATGGTGGT TTATCAGTGG AGTTATTGGA AGAGAACGAG AAGCTTCGGA 
550
GTCAAAACAT TCAGCTAAAC CGTGAGCTTA CTCAGATGAA ATCTATCTGC 
600
GATAATATCT ATAGTCTCAT GTCGAATTAC GTCGGATCTC AGCCCACTGA 
650
TCGGAGTTAT TCTCCCGGAG GTAGTAGTAG TCAACCGATG GAGTTTTTAC 
700
CGGCGAAGCG GTTTTCGGAG ATGGAGATTG AAGAAGAAGA AGAAGCGAGT 
750
CCGAGGTTGT TTGGTGTTCC GATTGGGTTA AAACGGACGA GAAGTGAAGG 
800
TGTTCAGGTG AAGACGACGG CGGTGGTTGG GGAAAATTCC GATGAGGAGA 
850
CGCCGTGGTT GAGACATTAT AATCGAACCA ATCAGAGAGT TTGTAATTAA 
900

>AT5G62020.1 longest ORF length:299
MNSPPVDAMI TGESSSQRSI PTPFLTKTFN LVEDSSIDDV ISWNEDGSSF 
50
IVWNPTDFAK DLLPKHFKHN NFSSFVRQLN TYGFKKVVPD RWEFSNDFFK 
100
RGEKRLLREI QRRKITTTHQ TVVAPSSEQR NQTMVVSPSN SGEDNNNNQV 
150
MSSSPSSWYC HQTKTTGNGG LSVELLEENE KLRSQNIQLN RELTQMKSIC 
200
DNIYSLMSNY VGSQPTDRSY SPGGSSSQPM EFLPAKRFSE MEIEEEEEAS 
250
PRLFGVPIGL KRTRSEGVQV KTTAVVGENS DEETPWLRHY NRTNQRVCN
300