fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G62320 ATMYB99, AtMYBCU15 myb domain protein 99 (.1)

>AT5G62320.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, XbaI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 213
EcoRI G|AATTC 694
EcoRV GAT|ATC 331
HindIII A|AGCTT 367
NcoI C|CATGG 49
SpeI A|CTAGT 75, 252
StyI C|C[AT][AT]GG 49, 276


Click here to view TAIR data

>AT5G62320.1 length:738
ATGGGTGGTC GTAAACCATG TTGTGATGAG GTTGGATTAA GAAAGGGTCC 
50
ATGGACAGTG GAAGAAGATG GGAAACTAGT TGATTTCTTA AGGGCACGTG 
100
GCAACTGCGG TGGTGGTGGA GGAGGATGGT GCTGGAGAGA CGTGCCAAAA 
150
CTGGCGGGGC TAAGGAGGTG TGGCAAAAGT TGCCGTCTCC GGTGGACTAA 
200
TTATCTCCGG CCAGATCTCA AGAGAGGTCT TTTTACTGAA GAAGAAATCC 
250
AACTAGTCAT TGATCTTCAT GCTCGCCTTG GCAATAGATG GTCGAAGATT 
300
GCAGTGGAGT TACCAGGAAG AACAGACAAC GATATCAAAA ATTATTGGAA 
350
CACTCATATA AAGAGGAAGC TTATAAGAAT GGGTATTGAT CCAAACACAC 
400
ATCGTCGATT TGACCAACAA AAAGTCAACG AGGAGGAAAC GATATTGGTC 
450
AACGATCCAA AGCCTCTGTC TGAGACCGAG GTATCTGTTG CTTTGAAGAA 
500
TGACACGTCA GCAGTGTTAT CAGGAAATCT AAACCAATTG GCTGACGTGG 
550
ACGGTGATGA TCAGCCGTGG AGCTTTCTAA TGGAAAATGA CGAAGGAGGA 
600
GGTGGCGACG CCGCCGGAGA GCTTACGATG CTATTGTCCG GTGACATTAC 
650
GTCATCATGT TCTTCTTCGT CATCTTTGTG GATGAAGTAT GGAGAATTCG 
700
GATACGAAGA TTTAGAACTT GGATGTTTCG ATGTTTAG
750

>AT5G62320.1 longest ORF length:245
MGGRKPCCDE VGLRKGPWTV EEDGKLVDFL RARGNCGGGG GGWCWRDVPK 
50
LAGLRRCGKS CRLRWTNYLR PDLKRGLFTE EEIQLVIDLH ARLGNRWSKI 
100
AVELPGRTDN DIKNYWNTHI KRKLIRMGID PNTHRRFDQQ KVNEEETILV 
150
NDPKPLSETE VSVALKNDTS AVLSGNLNQL ADVDGDDQPW SFLMENDEGG 
200
GGDAAGELTM LLSGDITSSC SSSSSLWMKY GEFGYEDLEL GCFDV
250