fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G62470 ATMYB96, mybcov1 myb domain protein 96 (.1.2)

>AT5G62470.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HpaI, KpnI, NdeI, NheI, NotI, PacI, PvuII, SacI, SalI, SmaI, XbaI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 112
HindIII A|AGCTT 894
NcoI C|CATGG 46
PstI CTGCA|G 153, 803
SpeI A|CTAGT 400
StyI C|C[AT][AT]GG 46, 746


Click here to view TAIR data

>AT5G62470.1 length:1056
ATGGGAAGAC CACCTTGCTG TGAAAAGATT GGAGTGAAGA AAGGGCCATG 
50
GACACCAGAG GAAGACATCA TCTTGGTTTC TTACATCCAA GAACATGGTC 
100
CTGGAAACTG GAGATCTGTC CCAACACACA CAGGTTTAAG ATGTAGCAAG 
150
AGCTGCAGAT TGAGATGGAC TAATTATCTT CGACCCGGTA TTAAGCGTGG 
200
AAATTTTACT GAGCATGAAG AGAAGACAAT TGTTCATCTT CAAGCCCTTT 
250
TAGGCAACAG ATGGGCAGCC ATAGCATCAT ACCTTCCAGA AAGGACAGAC 
300
AATGATATAA AGAACTATTG GAACACTCAC TTGAAGAAGA AGCTCAAAAA 
350
GATTAATGAA TCTGGTGAAG AAGATAATGA TGGTGTCTCT TCATCAAACA 
400
CTAGTTCACA AAAGAACCAT CAAAGCACTA ACAAAGGTCA ATGGGAAAGA 
450
AGACTTCAGA CAGACATTAA CATGGCAAAA CAAGCTCTTT GTGAGGCCTT 
500
GTCTTTAGAC AAACCATCAT CCACTCTTTC ATCATCTTCA TCATTACCGA 
550
CACCAGTAAT CACACAACAA AACATCCGTA ACTTCTCATC AGCTTTGCTT 
600
GACCGTTGTT ATGATCCATC CTCTTCTTCT TCATCTACCA CAACCACCAC 
650
TACAAGCAAC ACTACTAATC CATACCCATC AGGGGTATAT GCGTCAAGTG 
700
CTGAGAACAT CGCCCGGTTG CTTCAAGATT TCATGAAAGA CACACCCAAG 
750
GCTTTAACTT TATCATCTTC ATCTCCGGTT TCAGAGACTG GACCACTCAC 
800
TGCTGCAGTC TCGGAAGAAG GTGGAGAAGG GTTTGAACAA TCTTTCTTCA 
850
GCTTCAATTC AATGGACGAA ACTCAAAACT TGACTCAGGA GACAAGCTTC 
900
TTCCATGATC AAGTGATCAA ACCGGAAATA ACAATGGACC AAGATCATGG 
950
TCTAATATCA CAAGGGTCTC TGTCTTTGTT TGAGAAATGG TTATTTGATG 
1000
AGCAAAGCCA CGAGATGGTT GGTATGGCAC TAGCAGGACA AGAAGGGATG 
1050
TTCTAG
1100

>AT5G62470.1 longest ORF length:351
MGRPPCCEKI GVKKGPWTPE EDIILVSYIQ EHGPGNWRSV PTHTGLRCSK 
50
SCRLRWTNYL RPGIKRGNFT EHEEKTIVHL QALLGNRWAA IASYLPERTD 
100
NDIKNYWNTH LKKKLKKINE SGEEDNDGVS SSNTSSQKNH QSTNKGQWER 
150
RLQTDINMAK QALCEALSLD KPSSTLSSSS SLPTPVITQQ NIRNFSSALL 
200
DRCYDPSSSS SSTTTTTTSN TTNPYPSGVY ASSAENIARL LQDFMKDTPK 
250
ALTLSSSSPV SETGPLTAAV SEEGGEGFEQ SFFSFNSMDE TQNLTQETSF 
300
FHDQVIKPEI TMDQDHGLIS QGSLSLFEKW LFDEQSHEMV GMALAGQEGM 
350
F
400