fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G62610 bHLH079 basic helix-loop-helix (bHLH) DNA-binding superfamily protein (.1)

>AT5G62610.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, KpnI, NcoI, NheI, NotI, PacI, PvuII, SacI, SalI, SmaI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
HpaI GTT|AAC 121, 667
NdeI CA|TATG 808
PstI CTGCA|G 35
SpeI A|CTAGT 12


Click here to view TAIR data

>AT5G62610.1 length:846
ATGGACCCTC CACTAGTGAA CGATTCCTCC TTCTCTGCAG CTAATCCTTC 
50
TTCTTACACT CTCTCCGAGA TTTGGCCTTT CCCTGTAAAC GACGCCGTTC 
100
GCTCTGGTCT CCGTTTAGCT GTTAACTCCG GTCGAGTCTT TACTCGCTCT 
150
GAACATTCCG GCAATAAAGA CGTCTCCGCG GCTGAGGAAT CTACAGTCAC 
200
CGATCTAACT GCTGGCTGGG GAAGTAGAAA GACTAGAGAT TTGAACTCTG 
250
AGGATGATTC TTCAAAGATG GTTTCTTCCA GCAGCAGTGG TAATGAATTG 
300
AAAGAATCAG GGGATAAGAA AAGAAAACTG TGTGGATCTG AAAGTGGAAA 
350
TGGAGATGGT TCGATGAGAC CTGAAGGCGA AACAAGTTCG GGTGGTGGTG 
400
GAAGCAAAGC AACGGAACAG AAGAACAAAC CTGAGCCACC AAAGGATTAT 
450
ATTCATGTGA GAGCAAGAAG AGGACAAGCT ACTGACCGGC ATAGTTTAGC 
500
AGAGCGAGCT AGAAGAGAAA AGATCAGTGA GAAGATGACA GCTCTTCAAG 
550
ATATAATTCC AGGATGTAAT AAGATAATCG GAAAAGCCCT TGTGCTCGAT 
600
GAGATTATCA ATTATATTCA GTCATTGCAG CGGCAAGTTG AGTTTCTATC 
650
AATGAAGCTA GAAGTTGTTA ACTCGGGTGC AAGTACTGGT CCGACAATAG 
700
GAGTTTTTCC TTCCGGTGAT CTCGGGACTT TACCGATTGA CGTTCATCGA 
750
ACAATATACG AGCAACAAGA AGCTAATGAA ACCCGAGTAT CTCAACCGGA 
800
GTGGCTCCAT ATGCAGGTTG ATGGGAACTT TAACCGAACC ACATAA
850

>AT5G62610.1 longest ORF length:281
MDPPLVNDSS FSAANPSSYT LSEIWPFPVN DAVRSGLRLA VNSGRVFTRS 
50
EHSGNKDVSA AEESTVTDLT AGWGSRKTRD LNSEDDSSKM VSSSSSGNEL 
100
KESGDKKRKL CGSESGNGDG SMRPEGETSS GGGGSKATEQ KNKPEPPKDY 
150
IHVRARRGQA TDRHSLAERA RREKISEKMT ALQDIIPGCN KIIGKALVLD 
200
EIINYIQSLQ RQVEFLSMKL EVVNSGASTG PTIGVFPSGD LGTLPIDVHR 
250
TIYEQQEANE TRVSQPEWLH MQVDGNFNRT T
300