fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G63280 C2H2-like zinc finger protein (.1)

>AT5G63280.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
HpaI GTT|AAC 106
SacI GAGCT|C 459


Click here to view TAIR data

>AT5G63280.1 length:816
ATGGGAAGAC TTTGGGAATC ACTGCCCGTG ATTCTTCTAC TCTTAGTTCT 
50
TCTTCTTCAT CAATCAGTCT CTCAGGGGTT TGAAGAATCT GAATCTACTA 
100
GATTGGTTAA CGAAGAAGTA GAAGTTAGTA ATGCTCCAGA AATACATTGT 
150
TCCCGAGAAA GAAGTCGAGC AGCTTGGCAG ATTATACAAG ATTATTTGAC 
200
GCCATTTGTG GAACGGGAAA GATATGAAAT TCCAAAAAAT TGTAGGCTGC 
250
ATCCTGATAA TGATTTATAC AGAGATCAGG AACATCATAA GGTTCATGTT 
300
GATGTCTTCG AATGGAAATG TGGTTACTGC AAGAAAAGTT TCAATGATGA 
350
GAAATTTCTT GACAAGCATT TCAGTACTAG ACATTATAAT CTTTTAAATA 
400
CGACTGATAC AAAGTGTTTA GCCGACCTGT GTGGTGCATT GCATTGTGAC 
450
TTTGTATTGA GCTCTAAGAA ACCCAAGAGC AAGTGCAACC CTCCTGCTGT 
500
TGCCAAAAAC CGTCATCTCT GCGAGAGCGT TGCCAATAGT TGTTTCCCAG 
550
TGAGTCAAGG TCCCTCAGCT AGTCGTCTTC ATGAACACTT TTTGCGCCAA 
600
TTCTGTGATG CTCATACCTG CACTGGAAAT GATAAACCCT TTCCTAGAGG 
650
AGGCAAGAAG AAATCGGGTG TCTTCTACCT CGCCATTTCA ATATTGACCT 
700
TGATGCTACT CCCACTCTTT TATCTTCTAG TCTTCTTACA TCAAAGAGAA 
750
AAGAGAAGCG GAACACAAGA TTTGCGTCGT ATTATAAAAT CTGGAAAAAA 
800
AACAAAACCG TCATAA
850

>AT5G63280.1 longest ORF length:271
MGRLWESLPV ILLLLVLLLH QSVSQGFEES ESTRLVNEEV EVSNAPEIHC 
50
SRERSRAAWQ IIQDYLTPFV ERERYEIPKN CRLHPDNDLY RDQEHHKVHV 
100
DVFEWKCGYC KKSFNDEKFL DKHFSTRHYN LLNTTDTKCL ADLCGALHCD 
150
FVLSSKKPKS KCNPPAVAKN RHLCESVANS CFPVSQGPSA SRLHEHFLRQ 
200
FCDAHTCTGN DKPFPRGGKK KSGVFYLAIS ILTLMLLPLF YLLVFLHQRE 
250
KRSGTQDLRR IIKSGKKTKP S
300