Locus |
Common name |
Short description |
AT5G63470 |
NF-YC4 |
"nuclear factor Y, subunit C4", nuclear factor Y, subunit C4 (.1.2) |
>AT5G63470.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
BamHI
| G|GATCC |
615 |
BglII
| A|GATCT |
355 |
EcoRI
| G|AATTC |
672 |
EcoRV
| GAT|ATC |
406, 433 |
HindIII
| A|AGCTT |
320 |
NcoI
| C|CATGG |
726 |
PvuII
| CAG|CTG |
677 |
StyI
| C|C[AT][AT]GG |
463, 726, 744 |
Click here to view TAIR data
>AT5G63470.1 length:753
ATGGACAATA ACAACAACAA CAACAACCAG CAACCACCAC CAACCTCCGT | 50 |
CTATCCACCT GGCTCCGCCG TCACAACCGT AATCCCTCCT CCACCATCTG | 100 |
GATCTGCATC AATAGTCACC GGAGGAGGAG CGACATACCA CCACCTCCTC | 150 |
CAGCAACAAC AGCAACAGCT TCAAATGTTC TGGACATACC AGAGACAAGA | 200 |
GATCGAACAG GTAAACGATT TCAAAAACCA TCAGCTCCCT CTAGCTCGTA | 250 |
TCAAAAAAAT CATGAAAGCT GATGAAGATG TGCGTATGAT CTCCGCCGAA | 300 |
GCACCGATTC TCTTCGCGAA AGCTTGTGAG CTTTTCATTC TCGAACTTAC | 350 |
GATTAGATCT TGGCTTCACG CTGAAGAGAA CAAACGTCGT ACGCTTCAGA | 400 |
AAAACGATAT CGCTGCTGCG ATTACTAGAA CCGATATCTT CGATTTCCTT | 450 |
GTTGATATTG TTCCTAGGGA AGAGATCAAG GAAGAGGAAG ATGCAGCATC | 500 |
GGCTCTTGGT GGAGGAGGTA TGGTTGCTCC CGCCGCGAGC GGTGTTCCTT | 550 |
ATTATTATCC ACCGATGGGA CAACCGGCGG TTCCTGGAGG GATGATGATT | 600 |
GGAAGACCGG CGATGGATCC TAGCGGTGTT TATGCTCAGC CTCCTTCTCA | 650 |
GGCATGGCAA AGCGTTTGGC AGAATTCAGC TGGTGGTGGT GATGATGTGT | 700 |
CTTATGGAAG TGGAGGAAGT AGCGGCCATG GTAATCTCGA TAGCCAAGGT | 750 |
TGA | 800 |
>AT5G63470.1 longest ORF length:250
MDNNNNNNNQ QPPPTSVYPP GSAVTTVIPP PPSGSASIVT GGGATYHHLL | 50 |
QQQQQQLQMF WTYQRQEIEQ VNDFKNHQLP LARIKKIMKA DEDVRMISAE | 100 |
APILFAKACE LFILELTIRS WLHAEENKRR TLQKNDIAAA ITRTDIFDFL | 150 |
VDIVPREEIK EEEDAASALG GGGMVAPAAS GVPYYYPPMG QPAVPGGMMI | 200 |
GRPAMDPSGV YAQPPSQAWQ SVWQNSAGGG DDVSYGSGGS SGHGNLDSQG | 250 |
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