fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G63790 ANAC102 NAC domain containing protein 102 (.1)

>AT5G63790.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
NcoI C|CATGG 274
PvuII CAG|CTG 374
StyI C|C[AT][AT]GG 274


Click here to view TAIR data

>AT5G63790.1 length:939
ATGGACTTTG CTCTCTTCTC CTCGATTTCA ATCTTTGAGA TAAACCACAA 
50
AGATCCTCCG ATTCGAAGGT TTATAAAAAC TCAAAATCGA ATCTTATCCA 
100
CAAGAAAACA ACAAGGTACT TTTCCAAAAA TGAAGGCGGA GTTGAATTTG 
150
CCGGCGGGAT TCCGATTTCA TCCGACGGAC GAAGAGCTTG TCAAGTTCTA 
200
TCTTTGCCGG AGATGTGCGT CAGAACCGAT TAACGTTCCG GTTATCGCAG 
250
AGATTGACTT GTACAAATTC AATCCATGGG AGCTTCCAGA AATGGCGTTG 
300
TACGGTGAGA AAGAATGGTA CTTCTTCTCG CATAGAGACC GGAAATACCC 
350
AAACGGGTCG AGACCAAACC GGGCAGCTGG AACCGGTTAT TGGAAAGCGA 
400
CTGGAGCTGA TAAACCGATC GGAAAACCGA AGACGTTAGG GATTAAGAAA 
450
GCACTCGTCT TCTACGCAGG AAAAGCTCCG AAAGGGATTA AAACGAATTG 
500
GATTATGCAC GAGTATCGTC TCGCTAATGT CGATCGATCT GCTTCTACCA 
550
ACAAGAAGAA CAACTTAAGA CTTGATGATT GGGTTTTGTG TCGGATATAC 
600
AATAAGAAAG GAACAATGGA GAAGTATTTA CCGGCGGCGG CTGAGAAACC 
650
GACGGAAAAG ATGAGTACGT CGGACTCAAG ATGCTCAAGT CACGTGATTT 
700
CACCGGACGT CACGTGTTCT GATAACTGGG AGGTTGAGAG TGAGCCCAAA 
750
TGGATTAATC TGGAAGACGC GTTAGAGGCA TTTAATGATG ACACGTCCAT 
800
GTTTAGTTCC ATTGGTTTGT TGCAAAATGA CGCCTTTGTT CCTCAGTTTC 
850
AGTACCAGTC CTCCGATTTC GTCGATTCGT TTCAGGACCC GTTCGAGCAG 
900
AAACCGTTCT TGAATTGGAA TTTTGCTCCT CAAGGGTAA
950

>AT5G63790.1 longest ORF length:312
MDFALFSSIS IFEINHKDPP IRRFIKTQNR ILSTRKQQGT FPKMKAELNL 
50
PAGFRFHPTD EELVKFYLCR RCASEPINVP VIAEIDLYKF NPWELPEMAL 
100
YGEKEWYFFS HRDRKYPNGS RPNRAAGTGY WKATGADKPI GKPKTLGIKK 
150
ALVFYAGKAP KGIKTNWIMH EYRLANVDRS ASTNKKNNLR LDDWVLCRIY 
200
NKKGTMEKYL PAAAEKPTEK MSTSDSRCSS HVISPDVTCS DNWEVESEPK 
250
WINLEDALEA FNDDTSMFSS IGLLQNDAFV PQFQYQSSDF VDSFQDPFEQ 
300
KPFLNWNFAP QG
350