Locus |
Common name |
Short description |
AT5G64530 |
ANAC104, XND1 |
Arabidopsis NAC domain containing protein 104, xylem NAC domain 1 (.1) |
>AT5G64530.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SalI, SpeI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
HindIII
| A|AGCTT |
71, 152, 552 |
SacI
| GAGCT|C |
43 |
SmaI
| CCC|GGG |
145 |
StyI
| C|C[AT][AT]GG |
133 |
Click here to view TAIR data
>AT5G64530.1 length:564
ATGAATCTAC CACCGGGATT TAGGTTTTTT CCGACCGATG AAGAGCTCGT | 50 |
CGTTCACTTC CTCCACCGGA AAGCTTCCCT CTTGCCTTGT CACCCTGATG | 100 |
TCATCCCCGA CCTTGATCTT TACCATTACG ATCCTTGGGA CCTTCCCGGG | 150 |
AAAGCTTTGG GAGAAGGGAG GCAATGGTAC TTCTATAGTA GAAAGACACA | 200 |
AGAGAGAGTG ACAAGCAATG GGTATTGGGG ATCAATGGGA ATGGACGAGC | 250 |
CAATCTACAC AAGCTCCACA CACAAGAAAG TGGGAATCAA AAAGTATCTA | 300 |
ACTTTCTATC TCGGAGATTC TCAGACTAAT TGGATCATGC AAGAATATTC | 350 |
CCTCCCGGAT TCCTCTTCTT CATCTAGTCG ATCTTCTAAG AGATCAAGCC | 400 |
GTGCTTCTAG TTCTAGTCAC AAACCCGATT ATAGCAAGTG GGTGATATGC | 450 |
AGAGTGTATG AGCAAAATTG CAGTGAGGAG GAAGACGATG ATGGGACAGA | 500 |
ACTCTCATGT TTGGATGAAG TGTTTTTGTC TTTAGATGAT CTTGACGAAG | 550 |
TAAGCTTACC GTAA | 600 |
>AT5G64530.1 longest ORF length:187
MNLPPGFRFF PTDEELVVHF LHRKASLLPC HPDVIPDLDL YHYDPWDLPG | 50 |
KALGEGRQWY FYSRKTQERV TSNGYWGSMG MDEPIYTSST HKKVGIKKYL | 100 |
TFYLGDSQTN WIMQEYSLPD SSSSSSRSSK RSSRASSSSH KPDYSKWVIC | 150 |
RVYEQNCSEE EDDDGTELSC LDEVFLSLDD LDEVSLP | 200 |
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