fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G65100 Ethylene insensitive 3 family protein (.1)

>AT5G65100.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI
Name Recognition sequence Cut positions
BglII A|GATCT 926
EcoRI G|AATTC 528
HindIII A|AGCTT 157, 266, 752
StyI C|C[AT][AT]GG 1120
XhoI C|TCGAG 1260


Click here to view TAIR data

>AT5G65100.1 length:1674
ATGGTGGAGG TCCAAGATTT AGAACCACTT AGTCCAATAC AGGACTACGA 
50
TGAAGATGAC CTCGAAGAAG ACGTGGACGA ATTTGAACGT TTTGGTGAAG 
100
AAATCAGCTA CGACGATCTC AAGAAACGCA TGTGGAAAGA TCGAAACCTC 
150
ATGTGTAAGC TTAAACAGCA AAAAAGAGAT AATCTTAACT CCGTTATCTC 
200
TTCGCCGTCA TCTTCCACGT CAGCATCATC CTCTTCATCA TCCTCCGTTA 
250
TCGTGCGCCG AACTGAAGCT TCACGGCGCA AGAAAATGGC TCGATCTCAA 
300
GATTCGGTGT TGAAGTACAT GATGAAGATA ATGGAAGTTT GCAAAGCTCA 
350
AGGATTCGTT TACGGAATCG TACCGGAAAA AGGTAAACCG GTAACCGGTT 
400
CTTCAGACAG TTTAAGACGT TGGTGGAAAG AAAACGTTCA ATTCGACCAA 
450
ACCGCTCCAA ACGCTGTTTC TGATTACTTG ACATTAGCGG CTGCTCAGTT 
500
AATCTCATCA AACGAATCTT TAGATCCGAA TTCGTATATC CACATGCTTC 
550
ACGAGCTACA AGACACGACG TTAGGGTCAT TGTTATCAGC TTTGATGCAA 
600
CATTGCGTGC CGCCACAACG ACGGTTTCCG TTGGAAAAAG GTTTGGCTCC 
650
GCCGTGGTGG CCGAACGGGA CAGAGTTATG GTGGGGAGAG CAAGGAGCTG 
700
CGGCGTTTGA ACACGGTCCA CCTCCATATC GCAAACCGCA CGATCTAAGA 
750
AAAGCTTGGA AAGTGAGCGT TTTAGCGGCT GTGATTAAAC ACATGTCGCC 
800
GAATTTGGAG AGAGTGAGAC GGCTCGCGAG ACAGTCAAAG TGTTTGCAAG 
850
ATAAGATGAT GGCGAAAGAG ACTGATACTT GGTCTCGTGT GTTGAACCAA 
900
GAAGAAGCTC GTCTCAATCG CCTCAAGATC TCAGATGACG AAGACGAGGA 
950
TCGAGATCAA GAACAAGCAA GATTCACATG TTTTGATCAA GAACCGTCTC 
1000
TAAACACTTG TTTTATTGTA GGGCAAGATC AAGAACCGTT GGGATCAATG 
1050
AGGAAAGACA AAAGGGTTGA TCAGGAATTT TCCTCGAACG ATTGTTTCCT 
1100
TGTAGCGCAA GATCAAGAAC CTAGGAAAGG AAAAAAGGCT GATCAAGAAT 
1150
GGTCTCCAAA TTCTTGTTTT CTTGTTGATC AAGAACCATT AGGTAACAAG 
1200
AGAAAAGGTG AGTTCGTGGA AAAAGAGGCG ATGTTATCTA ATGTATACAC 
1250
TTGCCAAAAC TCGAGTTGTC CTTCGAGTGA TGTGAGTTTA GGATTCGTGG 
1300
ACAAGAACTT GAGAACCGGT CACGAGATTG AGTGTCTTTA CGGGACTCCA 
1350
GAACTGGTAA ACCAGAGTAG TGGTGGCGGC TCGGATGGGT TTGTTCGGTC 
1400
GATTACTACG AGTGACGATG ATTACAGCGC CAGCTCGAAA GCAGAGGACA 
1450
CAAGAGATTA TCATAATCAA GATGGAAACT GGCTAGATTA TCTCTGGTTC 
1500
GAGAGGTTAC ATGACTTGAA TTTTTCTGAT CAAGGATTTG AAGATCAAAC 
1550
AAGCACAGTG GATTTGAACC AATTACCAGA TCATTCTGAC TCCAATCAAA 
1600
CCATGAACGA GGATGACATC TCGTTATGGG ACATGGGTTG TGAAGACAAA 
1650
GATATTTATA TGTCTCAAGA TTGA
1700

>AT5G65100.1 longest ORF length:557
MVEVQDLEPL SPIQDYDEDD LEEDVDEFER FGEEISYDDL KKRMWKDRNL 
50
MCKLKQQKRD NLNSVISSPS SSTSASSSSS SSVIVRRTEA SRRKKMARSQ 
100
DSVLKYMMKI MEVCKAQGFV YGIVPEKGKP VTGSSDSLRR WWKENVQFDQ 
150
TAPNAVSDYL TLAAAQLISS NESLDPNSYI HMLHELQDTT LGSLLSALMQ 
200
HCVPPQRRFP LEKGLAPPWW PNGTELWWGE QGAAAFEHGP PPYRKPHDLR 
250
KAWKVSVLAA VIKHMSPNLE RVRRLARQSK CLQDKMMAKE TDTWSRVLNQ 
300
EEARLNRLKI SDDEDEDRDQ EQARFTCFDQ EPSLNTCFIV GQDQEPLGSM 
350
RKDKRVDQEF SSNDCFLVAQ DQEPRKGKKA DQEWSPNSCF LVDQEPLGNK 
400
RKGEFVEKEA MLSNVYTCQN SSCPSSDVSL GFVDKNLRTG HEIECLYGTP 
450
ELVNQSSGGG SDGFVRSITT SDDDYSASSK AEDTRDYHNQ DGNWLDYLWF 
500
ERLHDLNFSD QGFEDQTSTV DLNQLPDHSD SNQTMNEDDI SLWDMGCEDK 
550
DIYMSQD
600