fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G65130 Integrase-type DNA-binding superfamily protein (.1)

>AT5G65130.1 CDS map

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Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
EcoRI G|AATTC 87


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>AT5G65130.1 length:834
ATGGCTTTAA ACATGAATGC TTACGTAGAC GAGTTCATGG AAGCTCTTGA 
50
ACCATTCATG AAGGTAACTT CATCTTCTTC TACTTCGAAT TCATCAAATC 
100
CAAAACCATT AACTCCTAAT TTCATCCCTA ATAATGACCA AGTCTTACCG 
150
GTATCTAACC AAACCGGTCC GATTGGGCTA AACCAGCTCA CTCCAACACA 
200
AATCCTCCAA ATTCAGACAG AGTTACATCT CCGGCAAAAC CAATCTCGTC 
250
GTCGCGCTGG TAGTCATCTT CTCACCGCTA AACCAACCTC AATGAAGAAA 
300
ATCGACGTAG CAACTAAACC GGTTAAACTA TACCGAGGCG TAAGACAGAG 
350
GCAATGGGGT AAATGGGTAG CTGAGATTCG GCTACCTAAA AACCGAACCC 
400
GGTTATGGCT CGGTACGTTC GAAACGGCTC AAGAAGCTGC ATTAGCTTAC 
450
GATCAAGCAG CTCATAAGAT CAGAGGAGAC AACGCTCGTC TCAATTTCCC 
500
AGACATTGTT CGTCAAGGAC ACTATAAACA GATATTGTCT CCGTCTATCA 
550
ACGCAAAGAT CGAATCCATC TGCAATAGTT CTGATCTTCC ACTGCCTCAG 
600
ATCGAGAAAC AGAACAAAAC AGAGGAGGTG CTCTCTGGTT TTTCCAAACC 
650
GGAGAAAGAA CCGGAATTTG GGGAGATATA CGGATGCGGA TACTCGGGCT 
700
CATCTCCTGA GTCGGATATA ACGTTGTTGG ATTTCTCAAG CGACTGTGTG 
750
AAAGAAGATG AGAGTTTCTT GATGGGTTTG CACAAGTATC CTTCTTTGGA 
800
GATTGATTGG GACGCTATAG AGAAACTCTT CTGA
850

>AT5G65130.1 longest ORF length:277
MALNMNAYVD EFMEALEPFM KVTSSSSTSN SSNPKPLTPN FIPNNDQVLP 
50
VSNQTGPIGL NQLTPTQILQ IQTELHLRQN QSRRRAGSHL LTAKPTSMKK 
100
IDVATKPVKL YRGVRQRQWG KWVAEIRLPK NRTRLWLGTF ETAQEAALAY 
150
DQAAHKIRGD NARLNFPDIV RQGHYKQILS PSINAKIESI CNSSDLPLPQ 
200
IEKQNKTEEV LSGFSKPEKE PEFGEIYGCG YSGSSPESDI TLLDFSSDCV 
250
KEDESFLMGL HKYPSLEIDW DAIEKLF
300