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| Locus | Common name | Short description |
| AT5G65210 | TGA1 | bZIP transcription factor family protein (.1.2.3.4.5.6) |
>AT5G65210.2 CDS map
>>Show genomic map
Uncut enzymes: AatII, Acc65I, AccI, AclI, AfeI, AflII, AgeI, AhdI, AlwI, Aor51HI(Eco47III), ApaI, ApaLI, AscI, AseI, AvaII, AvrII, BaeI, BalI, BamHI, BanI, BbsI, BbvCI, BbvI, BcgI, BciVI, BglI, BglII, BlpI, BmrI, BpmI, BsaAI, BsaBI, BsaHI, BsaI, BsaXI, BseRI, BsgI, BsiWI, BslI, BsmAI, BsmBI, BsmFI, BsmI, BspDI, BspHI, BspMI, BspT107I(HgiCI), BsrBI, BsrFI, BsrGI, BssHII, BssSI, BstAPI, BstBI, BstEII, BstXI, BstYI, BstZ17I, BtrI, BtsI, Cfr10I, ClaI, DraI, DraIII, DrdI, EaeI, EagI, EarI, EciI, EcoNI, EcoO109I, FauI, FokI, FseI, HaeII, HaeIII, HgaI, HpaI, HphI, Hpy99I, I-CeuI, I-SceI, KasI, KpnI, MboII, MfeI, MlyI, MnlI, MscI, N.BstNBI, NaeI, , NarI, NciI, NdeI, NgoMIV, NheI, NlaIV, NotI, NruI, NsiI, PI-PspI, PI-SceI(VDE), PacI, PflFI, PflMI, PleI, PmeI, PmlI, PpuMI, PshAI, PsiI, PspOMI, PstI, PvuII, RsaI, RsrII, SacII, SalI, SapI, Sau96I, SbfI, ScaI, SexAI, SfaNI, SfcI, SfiI, SfoI, SgrAI, SmaI, SnaBI, SpeI, SphI, StuI, SwaI, Tsp45I, TspRI, Tth111I, XcmI, XmaI, XmnI
| Name | Recognition sequence | Cut positions |
| AccII(FnuDII) | CG|CG | 275, 811, 1005 |
| AccIII(BspMII) | T|CCGGA | 605 |
| AciI | C|CGC | 274 |
| AflIII | A|CPuPyGT | 167, 209, 812 |
| AluI | AG|CT | 223, 345, 555, 597, 834, 928, 1030, 1067 |
| AlwNI | CAGNNN|CTG | 325 |
| ApoI | Pu|AATTPy | 3, 906 |
| AvaI | C|PyCGPuG | 1019 |
| BanII | GPuGCPy|C | 1068 |
| BclI | T|GATCA | 957 |
| BfaI | C|TAG | 155, 234, 285, 378, 566, 767 |
| BsaJI | C|CNNGG | 186, 451 |
| BsaWI | [AT]|CCGG[AT] | 605 |
| BsiEI | CGPuPy|CG | 372 |
| BsiHKAI | G[AT]GC[AT]|C | 1068 |
| BsoBI | C|PyCGPuG | 1019 |
| Bsp1286I | G[GAT]GC[CAT]|C | 1068 |
| BspEI | T|CCGGA | 605 |
| BsrDI | GCAATGNN| | 106 |
| BsrI | ACTGGN| | 327 |
| BssKI | |CCNGG | 450 |
| BstF5I | GGATGNN| | 609, 657 |
| BstNI | CC|[AT]GG | 450 |
| BstUI | CG|CG | 275, 811, 1005 |
| Bsu36I | CC|TNAGG | 899 |
| BtgI | C|CPuPyGG | 186 |
| Cac8I | GCN|NGC | 264, 299, 801 |
| DdeI | C|TNAG | 519, 898, 1056 |
| DpnI | GA-CH3|TC | 215, 371, 713, 755, 956 |
| DpnII | |GATC | 215, 371, 713, 755, 956 |
| EcoRI | G|AATTC | 3, 906 |
| EcoRV | GAT|ATC | 550 |
| Fnu4HI | GC|NGC | 282, 459, 621, 836, 864, 1014 |
| FspI | TGC|GCA | 302 |
| HhaI | GCG|C | 301 |
| HinP1I | G|CGC | 301 |
| HincII | GTPy|PuAC | 816 |
| HindIII | A|AGCTT | 224, 929 |
| HinfI | G|ANTC | 391, 446, 679, 818 |
| HpaII | C|CGG | 604 |
| Hpy188I | TCN|GA | 149, 171, 435, 711, 992 |
| HpyCH4III | ACN|GT | 525 |
| HpyCH4IV | A|CGT | 165, 230, 1100 |
| HpyCH4V | TG|CA | 460, 776, 837, 862, 978 |
| MboI | |GATC | 215, 371, 713, 755, 956 |
| MluI | A|CGCGT | 812 |
| MseI | T|TAA | 543 |
| MslI | CAPyNN|NNPuTG | 743 |
| MspA1I | C[AC]G|C[GT]G | 866 |
| MspI | C|CGG | 604 |
| MwoI | GCNNNNN|NNGC | 100, 563, 627, 810 |
| NcoI | C|CATGG | 186 |
| NlaIII | CATG| | 185, 208, 442, 580, 646, 968 |
| NspI | PuCATG|Py | 209 |
| PaeR7I | C|TCGAG | 1019 |
| PciI | A|CATGT | 209 |
| PspGI | |CC[AT]GG | 450 |
| PvuI | CGAT|CG | 372 |
| SacI | GAGCT|C | 1068 |
| Sau3AI | |GATC | 215, 371, 713, 755, 956 |
| ScrFI | CC|NGG | 450 |
| SmlI | C|TPyPuAG | 721, 821, 963, 1019, 1065, 1071 |
| SspI | AAT|ATT | 97 |
| StyI | C|C[AT][AT]GG | 186 |
| Taqƒ¿I | T|CGA | 5, 11, 213, 369, 552, 570, 703, 1018, 1084 |
| TfiI | G|A[AT]TC | 391, 446, 679 |
| TliI | C|TCGAG | 1019 |
| TseI | G|C[AT]GC | 282, 459, 621, 836, 864 |
| Tsp509I | |AATT | 2, 63, 349, 354, 419, 905 |
| XbaI | T|CTAGA | 235, 768 |
| XhoI | C|TCGAG | 1019 |
Click here to view TAIR data
>AT5G65210.2 length:1107
ATGAATTCGA CATCGACACA TTTTGTGCCA CCGAGAAGAG TTGGTATATA | 50 |
CGAACCTGTC CATCAATTCG GTATGTGGGG GGAGAGTTTC AAAAGCAATA | 100 |
TTAGCAATGG GACTATGAAC ACACCAAACC ACATAATAAT ACCGAATAAT | 150 |
CAGAAACTAG ACAACAACGT GTCAGAGGAT ACTTCCCATG GAACAGCAGG | 200 |
AACTCCTCAC ATGTTCGATC AAGAAGCTTC AACGTCTAGA CATCCCGATA | 250 |
AGATACAAAG ACGGCTTGCT CAAAACCGCG AGGCTGCTAG GAAAAGTCGC | 300 |
TTGCGCAAGA AGGCTTATGT TCAGCAACTG GAAACAAGCA GGTTGAAGCT | 350 |
AATTCAATTA GAGCAAGAAC TCGATCGTGC TAGACAACAG GGATTCTATG | 400 |
TAGGAAACGG AATAGATACT AATTCTCTCG GTTTTTCGGA AACCATGAAT | 450 |
CCAGGGATTG CTGCATTTGA AATGGAATAT GGACATTGGG TTGAAGAACA | 500 |
GAACAGACAG ATATGTGAAC TAAGAACAGT TTTACACGGA CACATTAACG | 550 |
ATATCGAGCT TCGTTCGCTA GTCGAAAACG CCATGAAACA TTACTTTGAG | 600 |
CTTTTCCGGA TGAAATCGTC TGCTGCCAAA GCCGATGTCT TCTTCGTCAT | 650 |
GTCAGGGATG TGGAGAACTT CAGCAGAACG ATTCTTCTTA TGGATTGGCG | 700 |
GATTTCGACC CTCCGATCTT CTCAAGGTTC TTTTGCCACA TTTTGATGTC | 750 |
TTGACGGATC AACAACTTCT AGATGTATGC AATCTAAAAC AATCGTGTCA | 800 |
GCAAGCAGAA GACGCGTTGA CTCAAGGTAT GGAGAAGCTG CAACACACCC | 850 |
TTGCGGACTG CGTTGCAGCG GGACAACTCG GTGAAGGAAG TTACATTCCT | 900 |
CAGGTGAATT CTGCTATGGA TAGATTAGAA GCTTTGGTCA GTTTCGTAAA | 950 |
TCAGGCTGAT CACTTGAGAC ATGAAACATT GCAACAAATG TATCGGATAT | 1000 |
TGACAACGCG ACAAGCGGCT CGAGGATTAT TAGCTCTTGG TGAGTATTTT | 1050 |
CAACGGCTTA GAGCCTTGAG CTCAAGTTGG GCAACTCGAC ATCGTGAACC | 1100 |
AACGTAG | 1150 |
>AT5G65210.2 longest ORF length:368
MNSTSTHFVP PRRVGIYEPV HQFGMWGESF KSNISNGTMN TPNHIIIPNN | 50 |
QKLDNNVSED TSHGTAGTPH MFDQEASTSR HPDKIQRRLA QNREAARKSR | 100 |
LRKKAYVQQL ETSRLKLIQL EQELDRARQQ GFYVGNGIDT NSLGFSETMN | 150 |
PGIAAFEMEY GHWVEEQNRQ ICELRTVLHG HINDIELRSL VENAMKHYFE | 200 |
LFRMKSSAAK ADVFFVMSGM WRTSAERFFL WIGGFRPSDL LKVLLPHFDV | 250 |
LTDQQLLDVC NLKQSCQQAE DALTQGMEKL QHTLADCVAA GQLGEGSYIP | 300 |
QVNSAMDRLE ALVSFVNQAD HLRHETLQQM YRILTTRQAA RGLLALGEYF | 350 |
QRLRALSSSW ATRHREPT | 400 |