fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G65210 TGA1 bZIP transcription factor family protein (.1.2.3.4.5.6)

>AT5G65210.6 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, SpeI, StyI
Name Recognition sequence Cut positions
EcoRI G|AATTC 696
EcoRV GAT|ATC 340
HindIII A|AGCTT 14, 719
SacI GAGCT|C 858
XbaI T|CTAGA 25, 558
XhoI C|TCGAG 809


Click here to view TAIR data

>AT5G65210.6 length:897
ATGTTCGATC AAGAAGCTTC AACGTCTAGA CATCCCGATA AGATACAAAG 
50
ACGGCTTGCT CAAAACCGCG AGGCTGCTAG GAAAAGTCGC TTGCGCAAGA 
100
AGGCTTATGT TCAGCAACTG GAAACAAGCA GGTTGAAGCT AATTCAATTA 
150
GAGCAAGAAC TCGATCGTGC TAGACAACAG GGATTCTATG TAGGAAACGG 
200
AATAGATACT AATTCTCTCG GTTTTTCGGA AACCATGAAT CCAGGGATTG 
250
CTGCATTTGA AATGGAATAT GGACATTGGG TTGAAGAACA GAACAGACAG 
300
ATATGTGAAC TAAGAACAGT TTTACACGGA CACATTAACG ATATCGAGCT 
350
TCGTTCGCTA GTCGAAAACG CCATGAAACA TTACTTTGAG CTTTTCCGGA 
400
TGAAATCGTC TGCTGCCAAA GCCGATGTCT TCTTCGTCAT GTCAGGGATG 
450
TGGAGAACTT CAGCAGAACG ATTCTTCTTA TGGATTGGCG GATTTCGACC 
500
CTCCGATCTT CTCAAGGTTC TTTTGCCACA TTTTGATGTC TTGACGGATC 
550
AACAACTTCT AGATGTATGC AATCTAAAAC AATCGTGTCA GCAAGCAGAA 
600
GACGCGTTGA CTCAAGGTAT GGAGAAGCTG CAACACACCC TTGCGGACTG 
650
CGTTGCAGCG GGACAACTCG GTGAAGGAAG TTACATTCCT CAGGTGAATT 
700
CTGCTATGGA TAGATTAGAA GCTTTGGTCA GTTTCGTAAA TCAGGCTGAT 
750
CACTTGAGAC ATGAAACATT GCAACAAATG TATCGGATAT TGACAACGCG 
800
ACAAGCGGCT CGAGGATTAT TAGCTCTTGG TGAGTATTTT CAACGGCTTA 
850
GAGCCTTGAG CTCAAGTTGG GCAACTCGAC ATCGTGAACC AACGTAG
900

>AT5G65210.6 longest ORF length:298
MFDQEASTSR HPDKIQRRLA QNREAARKSR LRKKAYVQQL ETSRLKLIQL 
50
EQELDRARQQ GFYVGNGIDT NSLGFSETMN PGIAAFEMEY GHWVEEQNRQ 
100
ICELRTVLHG HINDIELRSL VENAMKHYFE LFRMKSSAAK ADVFFVMSGM 
150
WRTSAERFFL WIGGFRPSDL LKVLLPHFDV LTDQQLLDVC NLKQSCQQAE 
200
DALTQGMEKL QHTLADCVAA GQLGEGSYIP QVNSAMDRLE ALVSFVNQAD 
250
HLRHETLQQM YRILTTRQAA RGLLALGEYF QRLRALSSSW ATRHREPT
300