|
|
|
|
|
|
|
|
| Locus | Common name | Short description |
| AT5G65230 | ATMYB53 | myb domain protein 53 (.1) |
>AT5G65230.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, EcoRI, HindIII, HpaI, KpnI, NdeI, NheI, NotI, PacI, SacI, SalI, SmaI, SpeI, XbaI, XhoI
| Name | Recognition sequence | Cut positions |
| BglII | A|GATCT | 7 |
| EcoRV | GAT|ATC | 394 |
| NcoI | C|CATGG | 46 |
| PstI | CTGCA|G | 454 |
| PvuII | CAG|CTG | 105 |
| StyI | C|C[AT][AT]GG | 46 |
Click here to view TAIR data
>AT5G65230.1 length:933
ATGGGAAGAT CTCCTAGCTC AGATGAAACT GGTCTGAAGA AAGGTCCATG | 50 |
GTTGCCTGAA GAAGATGATA AACTGATCAA TTATATTCAC AAACATGGCC | 100 |
ATAGCAGCTG GAGTGCCCTT CCCAAGCTCG CTGGTCTTAA CAGGTGTGGG | 150 |
AAGAGTTGCA GGCTACGATG GACAAACTAT TTGAGACCAG ACATTAAGCG | 200 |
AGGAAAATTC TCTGCGGAGG AAGAAGAGAC CATCCTGAAC CTTCATGCGG | 250 |
TTCTAGGCAA CAAGTGGTCA ATGATTGCAA GCCACTTACC TGGACGAACT | 300 |
GACAATGAGA TCAAGAATTT CTGGAATACT CATTTGAAGA AAAAGCTGAT | 350 |
TCAGATGGGT TTTGACCCCA TGACCCATCA GCCAAGAACC GATGATATCT | 400 |
TCTCAAGTTT ATCTCAGCTC ATGTCTCTGT CTAACCTAAG AGGACTTGTT | 450 |
GATCTGCAGC AACAGTTTCC AATGGAAGAC CAAGCGCTAC TTAATCTCCA | 500 |
AACTGAGATG GCTAAGCTCC AATTGTTCCA ATACCTTCTT CAACCTTCTC | 550 |
CTGCTCCCAT GAGTATCAAC AACATTAACC CTAACATTCT CAATCTCCTC | 600 |
ATCAAAGAAA ACTCCGTTAC CAGTAATATC GACCTCGGTT TCCTCTCCTC | 650 |
TCATCTTCAA GACTTCAACA ACAACAACCT CCCTTCCCTC AAAACCCTAG | 700 |
ACGATAATCA CTTCAGTCAA AACACTTCTC CAATATGGCT CCATGAACCA | 750 |
CCGAGCTTGA ACCAAACTAT GTTGCCTACG CATGATCCTT GTGCTCAGAG | 800 |
TGTAGATGGT TTCGGCAGCA ACCAAGCCTC CTCAAGCCAT GATCAAGAAG | 850 |
TAGCAGTCAC AGACTCTGTA GATTGGCCTG ATCATCATCT ATTTGATGAT | 900 |
TCCATGTTTC CAGACATTTC TTATCAATCT TAA | 950 |
>AT5G65230.1 longest ORF length:310
MGRSPSSDET GLKKGPWLPE EDDKLINYIH KHGHSSWSAL PKLAGLNRCG | 50 |
KSCRLRWTNY LRPDIKRGKF SAEEEETILN LHAVLGNKWS MIASHLPGRT | 100 |
DNEIKNFWNT HLKKKLIQMG FDPMTHQPRT DDIFSSLSQL MSLSNLRGLV | 150 |
DLQQQFPMED QALLNLQTEM AKLQLFQYLL QPSPAPMSIN NINPNILNLL | 200 |
IKENSVTSNI DLGFLSSHLQ DFNNNNLPSL KTLDDNHFSQ NTSPIWLHEP | 250 |
PSLNQTMLPT HDPCAQSVDG FGSNQASSSH DQEVAVTDSV DWPDHHLFDD | 300 |
SMFPDISYQS | 350 |