fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G65320 bHLH099 basic helix-loop-helix (bHLH) DNA-binding superfamily protein (.1)

>AT5G65320.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XbaI
Name Recognition sequence Cut positions
HpaI GTT|AAC 675
XhoI C|TCGAG 591


Click here to view TAIR data

>AT5G65320.1 length:891
ATGATGTTCC AACAAGATTA CCCTCATGGC TTTTCACTCG TGGAAACATC 
50
CTTAAGTTAC GAAATGTTGG ATTACTTTCA AAACATCGTC GTTTCGAACT 
100
CTGAAGACGT GGCGTCACAG CAAAATTCCA TTTCGTCCTC TTCTTATTCA 
150
TCAGCGACAC TCTCCTGCTC CATAACAGAG CAAAAATCTC ACTTAACTGA 
200
AAAGTTATCT CCTCTACGAG AAAGATATGG TTGCGGTGAC TTTCTGTCGC 
250
GGAAGAGGAG AAGGAGAAGT GAAAAAACGA TTGTAGATAA AGAGAATCAA 
300
AGGATGAATC ACATTGCCGT CGAGCGTAAC CGGAGAAAAC AGATGAATCA 
350
TTTTCTGTCT ATCCTCAAGT CTATGATGCC TCTCTCTTAT TCTCAACCTA 
400
ATGACCAAGC ATCAATCATA GAAGGGACCA TTAGCTATCT GAAGAAGCTA 
450
GAACAACGTC TCCAATCTCT CGAAGCCCAA TTAAAAGCTA CTAAACTCAA 
500
TCAATCACCA AATATATTTT CCGACTTCTT CATGTTCCCT CAATACTCCA 
550
CCGCCACTGC CACTGCCACC GCCACTGCCT CCTCATCCTC CTCGAGCCAC 
600
CACCATCACA AGCGACTAGA GGTGGTTGCT GACGTGGAGG TTACAATGGT 
650
AGAAAGACAT GCCAACATTA AAGTGTTAAC GAAGACACAG CCAAGATTGC 
700
TCTTCAAGAT TATCAATGAG TTTAACTCTT TAGGTTTAAG TACTCTTCAT 
750
CTCAACCTCA CAACTTCCAA AGACATGTCT CTCTTCACTT TTAGCGTCAA 
800
GGTAGAGGCA GATTGTCAAT TGACGCCTTC TGGTAATGAG GTCGCAAATA 
850
CGGTGCATGA AGTCGTTAGA AGAGTTCACA AGGAACGTTG A
900

>AT5G65320.1 longest ORF length:296
MMFQQDYPHG FSLVETSLSY EMLDYFQNIV VSNSEDVASQ QNSISSSSYS 
50
SATLSCSITE QKSHLTEKLS PLRERYGCGD FLSRKRRRRS EKTIVDKENQ 
100
RMNHIAVERN RRKQMNHFLS ILKSMMPLSY SQPNDQASII EGTISYLKKL 
150
EQRLQSLEAQ LKATKLNQSP NIFSDFFMFP QYSTATATAT ATASSSSSSH 
200
HHHKRLEVVA DVEVTMVERH ANIKVLTKTQ PRLLFKIINE FNSLGLSTLH 
250
LNLTTSKDMS LFTFSVKVEA DCQLTPSGNE VANTVHEVVR RVHKER
300