fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G65590 AtDof5,7 Dof-type zinc finger DNA-binding family protein (.1)

>AT5G65590.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
EcoRI G|AATTC 905
HindIII A|AGCTT 911
PvuII CAG|CTG 406


Click here to view TAIR data

>AT5G65590.1 length:951
ATGTCCTCCC ATACCAATCT CCCCTCTCCC AAACCAGTTC CTAAACCAGA 
50
TCACCGTATC TCCGGTACAT CCCAAACCAA GAAACCACCG TCTTCCTCCG 
100
TAGCTCAAGA CCAACAAAAC CTAAAATGCC CTCGTTGCAA CTCTCCAAAC 
150
ACAAAGTTCT GTTACTACAA CAACTACAGT CTCTCTCAAC CTCGTCACTT 
200
CTGCAAATCT TGTCGCCGTT ACTGGACACG TGGCGGTGCT CTAAGAAACG 
250
TCCCCATCGG TGGTGGTTGC CGGAAAACCA AAAAATCTAT CAAACCTAAT 
300
TCCTCCATGA ACACACTTCC TTCGTCTTCT TCCTCTCAGA GGTTCTTCTC 
350
ATCAATCATG GAAGATTCAT CCAAATTCTT CCCTCCTCCG ACAACAATGG 
400
ATTTTCAGCT GGCCGGATTA TCTCTCAACA AAATGAACGA TCTTCAACTT 
450
TTGAATAACC AAGAAGTTCT TGATCTTAGG CCCATGATGT CCTCGGGCCG 
500
AGAAAACACA CCCGTTGATG TCGGGTCGGG TTTATCCCTA ATGGGTTTTG 
550
GAGATTTCAA CAACAACCAT TCACCGACGG GGTTCACAAC CGCCGGAGCA 
600
AGCGACGGAA ACTTAGCTTC TTCTATAGAG ACTTTGAGTT GTTTAAACCA 
650
AGATTTACAC TGGAGGCTTC AGCAACAGAG GATGGCGATG CTTTTTGGTA 
700
ATTCTAAGGA AGAAACTGTT GTCGTCGAGA GGCCACAACC TATTCTTTAT 
750
CGGAATCTTG AGATCGTAAA CTCATCATCG CCGTCGTCGC CGACGAAGAA 
800
AGGAGATAAT CAGACAGAGT GGTATTTTGG TAATAACAGT GATAATGAAG 
850
GAGTGATTAG TAATAATGCT AATACAGGAG GAGGAGGAAG TGAATGGAAC 
900
AATGGAATTC AAGCTTGGAC TGATCTTAAT CATTATAATG CATTGCCTTG 
950
A
1000

>AT5G65590.1 longest ORF length:316
MSSHTNLPSP KPVPKPDHRI SGTSQTKKPP SSSVAQDQQN LKCPRCNSPN 
50
TKFCYYNNYS LSQPRHFCKS CRRYWTRGGA LRNVPIGGGC RKTKKSIKPN 
100
SSMNTLPSSS SSQRFFSSIM EDSSKFFPPP TTMDFQLAGL SLNKMNDLQL 
150
LNNQEVLDLR PMMSSGRENT PVDVGSGLSL MGFGDFNNNH SPTGFTTAGA 
200
SDGNLASSIE TLSCLNQDLH WRLQQQRMAM LFGNSKEETV VVERPQPILY 
250
RNLEIVNSSS PSSPTKKGDN QTEWYFGNNS DNEGVISNNA NTGGGGSEWN 
300
NGIQAWTDLN HYNALP
350