Locus |
Common name |
Short description |
AT5G65590 |
AtDof5,7 |
Dof-type zinc finger DNA-binding family protein (.1) |
>AT5G65590.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
EcoRI
| G|AATTC |
905 |
HindIII
| A|AGCTT |
911 |
PvuII
| CAG|CTG |
406 |
Click here to view TAIR data
>AT5G65590.1 length:951
ATGTCCTCCC ATACCAATCT CCCCTCTCCC AAACCAGTTC CTAAACCAGA | 50 |
TCACCGTATC TCCGGTACAT CCCAAACCAA GAAACCACCG TCTTCCTCCG | 100 |
TAGCTCAAGA CCAACAAAAC CTAAAATGCC CTCGTTGCAA CTCTCCAAAC | 150 |
ACAAAGTTCT GTTACTACAA CAACTACAGT CTCTCTCAAC CTCGTCACTT | 200 |
CTGCAAATCT TGTCGCCGTT ACTGGACACG TGGCGGTGCT CTAAGAAACG | 250 |
TCCCCATCGG TGGTGGTTGC CGGAAAACCA AAAAATCTAT CAAACCTAAT | 300 |
TCCTCCATGA ACACACTTCC TTCGTCTTCT TCCTCTCAGA GGTTCTTCTC | 350 |
ATCAATCATG GAAGATTCAT CCAAATTCTT CCCTCCTCCG ACAACAATGG | 400 |
ATTTTCAGCT GGCCGGATTA TCTCTCAACA AAATGAACGA TCTTCAACTT | 450 |
TTGAATAACC AAGAAGTTCT TGATCTTAGG CCCATGATGT CCTCGGGCCG | 500 |
AGAAAACACA CCCGTTGATG TCGGGTCGGG TTTATCCCTA ATGGGTTTTG | 550 |
GAGATTTCAA CAACAACCAT TCACCGACGG GGTTCACAAC CGCCGGAGCA | 600 |
AGCGACGGAA ACTTAGCTTC TTCTATAGAG ACTTTGAGTT GTTTAAACCA | 650 |
AGATTTACAC TGGAGGCTTC AGCAACAGAG GATGGCGATG CTTTTTGGTA | 700 |
ATTCTAAGGA AGAAACTGTT GTCGTCGAGA GGCCACAACC TATTCTTTAT | 750 |
CGGAATCTTG AGATCGTAAA CTCATCATCG CCGTCGTCGC CGACGAAGAA | 800 |
AGGAGATAAT CAGACAGAGT GGTATTTTGG TAATAACAGT GATAATGAAG | 850 |
GAGTGATTAG TAATAATGCT AATACAGGAG GAGGAGGAAG TGAATGGAAC | 900 |
AATGGAATTC AAGCTTGGAC TGATCTTAAT CATTATAATG CATTGCCTTG | 950 |
A | 1000 |
>AT5G65590.1 longest ORF length:316
MSSHTNLPSP KPVPKPDHRI SGTSQTKKPP SSSVAQDQQN LKCPRCNSPN | 50 |
TKFCYYNNYS LSQPRHFCKS CRRYWTRGGA LRNVPIGGGC RKTKKSIKPN | 100 |
SSMNTLPSSS SSQRFFSSIM EDSSKFFPPP TTMDFQLAGL SLNKMNDLQL | 150 |
LNNQEVLDLR PMMSSGRENT PVDVGSGLSL MGFGDFNNNH SPTGFTTAGA | 200 |
SDGNLASSIE TLSCLNQDLH WRLQQQRMAM LFGNSKEETV VVERPQPILY | 250 |
RNLEIVNSSS PSSPTKKGDN QTEWYFGNNS DNEGVISNNA NTGGGGSEWN | 300 |
NGIQAWTDLN HYNALP | 350 |
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