fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G65640 bHLH093 beta HLH protein 93 (.1.2)

>AT5G65640.2 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SmaI, SpeI, StyI, XbaI
Name Recognition sequence Cut positions
HindIII A|AGCTT 511
SalI G|TCGAC 9
XhoI C|TCGAG 820


Click here to view TAIR data

>AT5G65640.2 length:873
ATGGAACTGT CGACTCAAAT GAATGTGTTC GAAGAGCTTC TTGTTCCGAC 
50
AAAGCAAGAA ACAACCGACA ACAACATCAA CAATCTGAGC TTTAATGGCG 
100
GATTTGATCA TCATCATCAT CAATTCTTCC CAAATGGATA TAATATTGAT 
150
TACCTCTGTT TCAACAATGA AGAAGAAGAC GAAAATACCC TTTTGTATCC 
200
TTCTTCTTTC ATGGATCTAA TCTCTCAACC TCCTCCATTG CTTCTTCACC 
250
AACCGCCACC GTTACAACCA CTGTCGCCGC CGTTATCCTC CTCCGCGACC 
300
GCCGGAGCAA CATTTGACTA CCCTTTTCTT GAGGCTTTGC AAGAGATAAT 
350
TGACTCTTCT TCCTCATCGC CTCCATTGAT CCTTCAAAAT GGTCAAGAAG 
400
AGAACTTTAA TAATCCGATG TCGTATCCCT CTCCATTGAT GGAGTCTGAT 
450
CAGAGCAAGA GCTTCAGTGT TGGTTACTGT GGAGGAGAGA CGAACAAGAA 
500
GAAGAGCAAA AAGCTTGAAG GCCAACCTTC TAAGAATCTC ATGGCGGAGA 
550
GACGACGGAG AAAACGACTT AACGATCGTC TTTCTATGCT CCGATCCATC 
600
GTCCCAAAAA TCAGTAAGAT GGACAGGACA TCGATATTAG GAGATGCCAT 
650
AGATTACATG AAAGAGCTTT TAGACAAAAT CAACAAATTA CAAGATGAGG 
700
AACAAGAACT TGGAAATAGC AACAATTCAC ATCACTCTAA GCTCTTCGGT 
750
GATCTCAAGG ATCTTAATGC GAACGAACCT CTGGTCAGAA ACTCACCAAA 
800
GATCGTAGAG ACGAGGATAC TCGAGTTGAT ATATGCTGCT CGCCAAAACC 
850
GGGATTGCTA CTATCTACTG TGA
900

>AT5G65640.2 longest ORF length:290
MELSTQMNVF EELLVPTKQE TTDNNINNLS FNGGFDHHHH QFFPNGYNID 
50
YLCFNNEEED ENTLLYPSSF MDLISQPPPL LLHQPPPLQP LSPPLSSSAT 
100
AGATFDYPFL EALQEIIDSS SSSPPLILQN GQEENFNNPM SYPSPLMESD 
150
QSKSFSVGYC GGETNKKKSK KLEGQPSKNL MAERRRRKRL NDRLSMLRSI 
200
VPKISKMDRT SILGDAIDYM KELLDKINKL QDEEQELGNS NNSHHSKLFG 
250
DLKDLNANEP LVRNSPKIVE TRILELIYAA RQNRDCYYLL 
300