fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G65670 IAA9 indole-3-acetic acid inducible 9 (.1.2)

>AT5G65670.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
PstI CTGCA|G 533, 974
StyI C|C[AT][AT]GG 539, 737


Click here to view TAIR data

>AT5G65670.1 length:1017
ATGTCCCCGG AAGAGGAGCT ACAGAGCAAT GTATCGGTGG CTAGTTCTTC 
50
ACCTACTAGC AATTGCATCT CCAGGAACAC TCTAGGAGGA CTTAAAGAGC 
100
ATAACTACTT GGGTCTCTCT GATTGTTCTT CTGTTGGAAG CTCTACTCTC 
150
TCTCCCCTTG CTGAAGATGA CAAAGCTACT ATCAGCCTCA AGGCTACGGA 
200
GCTGACACTT GGTCTTCCTG GATCACAATC TCCTGCGAGA GACACAGAGC 
250
TTAACCTTTT GAGCCCAGCA AAGCTAGATG AGAAGCCATT CTTTCCTTTG 
300
CTTCCTTCTA AAGATGAGAT ATGCTCCTCC TCGCAAAAGA ACAATGCATC 
350
GGGAAACAAA AGAGGCTTTT CTGACACAAT GGATCAGTTT GCTGAAGCTA 
400
AAAGTTCAGT GTATACTGAG AAAAACTGGA TGTTCCCTGA AGCAGCAGCC 
450
ACCCAGTCTG TAACAAAGAA AGATGTGCCA CAAAACATAC CCAAAGGACA 
500
GTCTAGCACT ACAAACAATA GCTCTAGTCC ACCTGCAGCC AAGGCACAAA 
550
TTGTCGGTTG GCCTCCAGTG AGATCCTACA GGAAGAACAC ATTGGCCACT 
600
ACTTGTAAGA ACAGTGACGA AGTTGATGGG AGGCCAGGTT CTGGGGCTCT 
650
CTTCGTGAAG GTCAGTATGG ATGGTGCTCC TTATCTGAGG AAAGTTGACC 
700
TGAGGAGCTA CACTAACTAC GGGGAGCTTT CTTCAGCCTT GGAGAAAATG 
750
TTCACCACTT TCACTCTTGG TCAATGTGGA TCTAATGGAG CTGCTGGGAA 
800
GGATATGCTT AGTGAGACCA AGCTCAAGGA TCTTTTGAAT GGAAAAGACT 
850
ATGTGCTCAC TTATGAGGAT AAGGATGGTG ACTGGATGCT TGTTGGAGAT 
900
GTTCCGTGGG AGATGTTTAT TGATGTCTGC AAGAAGCTGA AGATAATGAA 
950
AGGGTGTGAT GCTATTGGGT TAGCTGCAGC TCCGAGAGCA ATGGAGAAAT 
1000
CGAAGATGAG AGCTTAA
1050

>AT5G65670.1 longest ORF length:338
MSPEEELQSN VSVASSSPTS NCISRNTLGG LKEHNYLGLS DCSSVGSSTL 
50
SPLAEDDKAT ISLKATELTL GLPGSQSPAR DTELNLLSPA KLDEKPFFPL 
100
LPSKDEICSS SQKNNASGNK RGFSDTMDQF AEAKSSVYTE KNWMFPEAAA 
150
TQSVTKKDVP QNIPKGQSST TNNSSSPPAA KAQIVGWPPV RSYRKNTLAT 
200
TCKNSDEVDG RPGSGALFVK VSMDGAPYLR KVDLRSYTNY GELSSALEKM 
250
FTTFTLGQCG SNGAAGKDML SETKLKDLLN GKDYVLTYED KDGDWMLVGD 
300
VPWEMFIDVC KKLKIMKGCD AIGLAAAPRA MEKSKMRA
350