Locus |
Common name |
Short description |
AT5G65670 |
IAA9 |
indole-3-acetic acid inducible 9 (.1.2) |
>AT5G65670.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
PstI
| CTGCA|G |
533, 974 |
StyI
| C|C[AT][AT]GG |
539, 737 |
Click here to view TAIR data
>AT5G65670.1 length:1017
ATGTCCCCGG AAGAGGAGCT ACAGAGCAAT GTATCGGTGG CTAGTTCTTC | 50 |
ACCTACTAGC AATTGCATCT CCAGGAACAC TCTAGGAGGA CTTAAAGAGC | 100 |
ATAACTACTT GGGTCTCTCT GATTGTTCTT CTGTTGGAAG CTCTACTCTC | 150 |
TCTCCCCTTG CTGAAGATGA CAAAGCTACT ATCAGCCTCA AGGCTACGGA | 200 |
GCTGACACTT GGTCTTCCTG GATCACAATC TCCTGCGAGA GACACAGAGC | 250 |
TTAACCTTTT GAGCCCAGCA AAGCTAGATG AGAAGCCATT CTTTCCTTTG | 300 |
CTTCCTTCTA AAGATGAGAT ATGCTCCTCC TCGCAAAAGA ACAATGCATC | 350 |
GGGAAACAAA AGAGGCTTTT CTGACACAAT GGATCAGTTT GCTGAAGCTA | 400 |
AAAGTTCAGT GTATACTGAG AAAAACTGGA TGTTCCCTGA AGCAGCAGCC | 450 |
ACCCAGTCTG TAACAAAGAA AGATGTGCCA CAAAACATAC CCAAAGGACA | 500 |
GTCTAGCACT ACAAACAATA GCTCTAGTCC ACCTGCAGCC AAGGCACAAA | 550 |
TTGTCGGTTG GCCTCCAGTG AGATCCTACA GGAAGAACAC ATTGGCCACT | 600 |
ACTTGTAAGA ACAGTGACGA AGTTGATGGG AGGCCAGGTT CTGGGGCTCT | 650 |
CTTCGTGAAG GTCAGTATGG ATGGTGCTCC TTATCTGAGG AAAGTTGACC | 700 |
TGAGGAGCTA CACTAACTAC GGGGAGCTTT CTTCAGCCTT GGAGAAAATG | 750 |
TTCACCACTT TCACTCTTGG TCAATGTGGA TCTAATGGAG CTGCTGGGAA | 800 |
GGATATGCTT AGTGAGACCA AGCTCAAGGA TCTTTTGAAT GGAAAAGACT | 850 |
ATGTGCTCAC TTATGAGGAT AAGGATGGTG ACTGGATGCT TGTTGGAGAT | 900 |
GTTCCGTGGG AGATGTTTAT TGATGTCTGC AAGAAGCTGA AGATAATGAA | 950 |
AGGGTGTGAT GCTATTGGGT TAGCTGCAGC TCCGAGAGCA ATGGAGAAAT | 1000 |
CGAAGATGAG AGCTTAA | 1050 |
>AT5G65670.1 longest ORF length:338
MSPEEELQSN VSVASSSPTS NCISRNTLGG LKEHNYLGLS DCSSVGSSTL | 50 |
SPLAEDDKAT ISLKATELTL GLPGSQSPAR DTELNLLSPA KLDEKPFFPL | 100 |
LPSKDEICSS SQKNNASGNK RGFSDTMDQF AEAKSSVYTE KNWMFPEAAA | 150 |
TQSVTKKDVP QNIPKGQSST TNNSSSPPAA KAQIVGWPPV RSYRKNTLAT | 200 |
TCKNSDEVDG RPGSGALFVK VSMDGAPYLR KVDLRSYTNY GELSSALEKM | 250 |
FTTFTLGQCG SNGAAGKDML SETKLKDLLN GKDYVLTYED KDGDWMLVGD | 300 |
VPWEMFIDVC KKLKIMKGCD AIGLAAAPRA MEKSKMRA | 350 |
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